AT2G15010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.690 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant thionin | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Plant thionin; FUNCTIONS IN: toxin receptor binding; INVOLVED IN: defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thionin (InterPro:IPR001010); BEST Arabidopsis thaliana protein match is: thionin 2.2 (TAIR:AT5G36910.1); Has 195 Blast hits to 195 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:6484422..6485001 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 14260.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.26 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.14 | ||||||||||||||||||||||||||||||||||||||||
| Length | 135 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGKTVIFSV LVMGLVISQI QVEAQKTCCP SQSTRKEFED CISEGNLQIL CSAESGCRDT YVGYCPSGFP YGSLTNSGDV VNVYCKLGCV SSLCGALTSL 101: QKLDTSGKVN VAVERCTKAC STICTKGSKT AVETV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)