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AT4G27160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.461
vacuole 0.369
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : seed storage albumin 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
seed storage albumin 3 (SESA3); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 2 (TAIR:AT4G27150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:14111eggNOG:ENOG410JWSWeggNOG:ENOG41104N4EMBL:AL035680
EMBL:AL161566EMBL:AY080779EMBL:AY117157EMBL:CP002687
EMBL:M22035EMBL:Z17580EMBL:Z24744EnsemblPlants:AT4G27160
EnsemblPlants:AT4G27160.1entrez:828824Gene3D:1.10.120.10GeneID:828824
Genevisible:P15459GO:GO:0043424GO:GO:0045735Gramene:AT4G27160.1
hmmpanther:PTHR35496hmmpanther:PTHR35496:SF1HOGENOM:HOG000123289InParanoid:P15459
IntAct:P15459InterPro:IPR000617InterPro:IPR013771InterPro:IPR016140
KEGG:ath:AT4G27160OMA:IPRMCNIPaxDb:P15459Pfam:P15459
Pfam:PF00234PhylomeDB:P15459PIR:JA0163PRIDE:P15459
PRINTS:PR00496PRO:PR:P15459ProteinModelPortal:P15459Proteomes:UP000006548
RefSeq:NP_194446.1SMART:SM00499SMR:P15459STRING:3702.AT4G27160.1
SUPFAM:SSF47699TAIR:AT4G27160tair10-symbols:AT2S3tair10-symbols:SESA3
TMHMM:TMhelixUniGene:At.19908UniProt:P15459
Coordinates (TAIR10) chr4:+:13611836..13612330
Molecular Weight (calculated) 18763.50 Da
IEP (calculated) 7.87
GRAVY (calculated) -0.50
Length 164 amino acids
Sequence (TAIR10)
(BLAST)
001: MANKLFLVCA TLALCFLLTN ASIYRTVVEF EEDDASNPVG PRQRCQKEFQ QSQHLRACQR WMSKQMRQGR GGGPSLDDEF DFEGPQQGYQ LLQQCCNELR
101: QEEPVCVCPT LKQAARAVSL QGQHGPFQSR KIYQSAKYLP NICKIQQVGE CPFQTTIPFF PPYY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)