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AT4G27140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.971
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : seed storage albumin 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
seed storage albumin 1 (SESA1); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, leaf apex, leaf; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 4 (TAIR:AT4G27170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:14109eggNOG:ENOG410JWSWeggNOG:ENOG41104N4EMBL:AF370541
EMBL:AL035680EMBL:AL161566EMBL:AY072508EMBL:CP002687
EMBL:M22032EMBL:Z24745EnsemblPlants:AT4G27140EnsemblPlants:AT4G27140.1
entrez:828822GeneID:828822Genevisible:P15457GO:GO:0045735
Gramene:AT4G27140.1hmmpanther:PTHR35496hmmpanther:PTHR35496:SF1HOGENOM:HOG000123289
InParanoid:P15457IntAct:P15457InterPro:IPR000617InterPro:IPR016140
KEGG:ath:AT4G27140OMA:PMQVRKIPaxDb:P15457Pfam:P15457
Pfam:PF00234PhylomeDB:P15457PIR:JA0161PRIDE:P15457
PRINTS:PR00496PRO:PR:P15457ProteinModelPortal:P15457Proteomes:UP000006548
RefSeq:NP_194444.1SMART:SM00499SMR:P15457STRING:3702.AT4G27140.1
SUPFAM:SSF47699TAIR:AT4G27140tair10-symbols:AT2S1tair10-symbols:SESA1
TMHMM:TMhelixUniGene:At.158UniProt:P15457
Coordinates (TAIR10) chr4:+:13607363..13607857
Molecular Weight (calculated) 19014.80 Da
IEP (calculated) 5.71
GRAVY (calculated) -0.58
Length 164 amino acids
Sequence (TAIR10)
(BLAST)
001: MANKLFLVCA ALALCFLLTN ASIYRTVVEF EEDDATNPIG PKMRKCRKEF QKEQHLRACQ QLMLQQARQG RSDEFDFEDD MENPQGQQQE QQLFQQCCNE
101: LRQEEPDCVC PTLKQAAKAV RLQGQHQPMQ VRKIYQTAKH LPNVCDIPQV DVCPFNIPSF PSFY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)