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AT5G09640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine carboxypeptidase-like 19
Curator
Summary (TAIR10)
encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.
Computational
Description (TAIR10)
serine carboxypeptidase-like 19 (SCPL19); FUNCTIONS IN: sinapoyltransferase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis, secondary metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 3 (TAIR:AT1G73280.1); Has 3721 Blast hits to 3663 proteins in 396 species: Archae - 0; Bacteria - 292; Metazoa - 624; Fungi - 837; Plants - 1544; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G09640-MONOMERBRENDA:2.3.1.91EC:2.3.1.91eggNOG:COG2939
eggNOG:KOG1282EMBL:AB020752EMBL:AL353994EMBL:AY033947
EMBL:AY063833EMBL:AY091309EMBL:CP002688EnsemblPlants:AT5G09640
EnsemblPlants:AT5G09640.1entrez:830823ESTHER:arath-SCP19Gene3D:3.40.50.1820
GeneID:830823Genevisible:Q8VZU3GO:GO:0005576GO:GO:0006508
GO:GO:0016752GO:GO:0019748GO:GO:0047202Gramene:AT5G09640.1
gramene_pathway:2.3.1.91gramene_pathway:PWY-3301hmmpanther:PTHR11802hmmpanther:PTHR11802:SF29
HOGENOM:HOG000198297InParanoid:Q8VZU3InterPro:IPR001563InterPro:IPR029058
KEGG:ath:AT5G09640KO:K09756MEROPS:S10.A18OMA:AFKGDEY
PANTHER:PTHR11802PaxDb:Q8VZU3PDB:2DRGPDBsum:2DRG
Pfam:PF00450Pfam:Q8VZU3PhylomeDB:Q8VZU3PIR:T49934
PRIDE:Q8VZU3PRINTS:PR00724PRO:PR:Q8VZU3ProteinModelPortal:Q8VZU3
Proteomes:UP000006548RefSeq:NP_568215.2SMR:Q8VZU3STRING:3702.AT5G09640.1
SUPFAM:SSF53474TAIR:AT5G09640tair10-symbols:SCPL19tair10-symbols:SNG2
TMHMM:TMhelixUniGene:At.1794UniGene:At.21648UniProt:Q8VZU3
Coordinates (TAIR10) chr5:+:2988373..2990966
Molecular Weight (calculated) 52581.40 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.24
Length 465 amino acids
Sequence (TAIR10)
(BLAST)
001: MRNLSFIVLF LLTLFFIHHL VDASLLVKSL PGFEGPLPFE LETGYVSIGE SGDVELFYYF VKSERNPEND PLMIWLTGGP GCSSICGLLF ANGPLAFKGD
101: EYNGTVPPLE LTSFSWTKVA NILYLEAPAG SGYSYAKTRR AFESSDTKQM HQIDQFLRSW FVKHPEFISN PFYVGGDSYS GKIVPGAVQQ ISLGNEKGLT
201: PLINIQGYVL GNPVTDKNIE TNYRVPFAHG MGLISDELFE SLERSCGGKF FNVDPSNARC SNNLQAYDHC MSEIYSEHIL LRNCKVDYVL ADTPNIRTDR
301: RRVMKEFSVN DSSSLPPPSC FTYRYFLSAF WANDENVRRA LGVKKEVGKW NRCNSQNIPY TFEIFNAVPY HVNNSLKGFR SLIYSGDHDS MVPFSSTQAW
401: IRALNYSIVD DWRPWMMSSN QVAGYTRTYA NKMTFATIKG GGHTAEYTPD QCSLMFRRWI DGEPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)