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AT4G39350.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cellulose synthase A2
Curator
Summary (TAIR10)
Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.
Computational
Description (TAIR10)
cellulose synthase A2 (CESA2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A9 (TAIR:AT2G21770.1); Has 3166 Blast hits to 2799 proteins in 618 species: Archae - 10; Bacteria - 1096; Metazoa - 3; Fungi - 18; Plants - 1940; Viruses - 5; Other Eukaryotes - 94 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G39350-MONOMERBioGrid:15370CAZy:GT2EC:2.4.1.12
eggNOG:COG1215eggNOG:ENOG410IER8EMBL:AF027173EMBL:AL050351
EMBL:AL161595EMBL:AY059858EMBL:AY093308EMBL:CP002687
EnsemblPlants:AT4G39350EnsemblPlants:AT4G39350.1entrez:830090ExpressionAtlas:O48947
Gene3D:3.30.40.10GeneID:830090Genevisible:O48947GO:GO:0005886
GO:GO:0008270GO:GO:0016021GO:GO:0016760GO:GO:0030244
GO:GO:0071555Gramene:AT4G39350.1gramene_pathway:2.4.1.12gramene_pathway:PWY-1001
hmmpanther:PTHR13301hmmpanther:PTHR13301:SF27HOGENOM:HOG000241942InParanoid:O48947
InterPro:IPR001841InterPro:IPR005150InterPro:IPR013083InterPro:IPR027934
InterPro:IPR029044iPTMnet:O48947KEGG:00500+2.4.1.12KEGG:ath:AT4G39350
KO:K10999OMA:QARSMVPPaxDb:O48947PaxDb:W8QPD2
Pfam:O48947Pfam:PF03552Pfam:PF14569Pfscan:PS50089
PhylomeDB:O48947PIR:T08583PRIDE:O48947PRO:PR:O48947
PROSITE:PS50089ProteinModelPortal:O48947Proteomes:UP000006548RefSeq:NP_195645.1
SMR:O48947STRING:3702.AT4G39350.1SUPFAM:SSF53448SUPFAM:SSF57850
TAIR:AT4G39350tair10-symbols:ATCESA2tair10-symbols:ATH-Atair10-symbols:CESA2
TMHMM:TMhelixUniGene:At.3315UniPathway:UPA00695UniProt:O48947
UniProt:W8QPD2
Coordinates (TAIR10) chr4:+:18297078..18301890
Molecular Weight (calculated) 122076.00 Da
IEP (calculated) 7.48
GRAVY (calculated) -0.21
Length 1084 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNTGGRLIAG SHNRNEFVLI NADESARIRS VQELSGQTCQ ICGDEIELTV SSELFVACNE CAFPVCRPCY EYERREGNQA CPQCKTRYKR IKGSPRVDGD
0101: DEEEEDIDDL EYEFDHGMDP EHAAEAALSS RLNTGRGGLD SAPPGSQIPL LTYCDEDADM YSDRHALIVP PSTGYGNRVY PAPFTDSSAP PQARSMVPQK
0201: DIAEYGYGSV AWKDRMEVWK RRQGEKLQVI KHEGGNNGRG SNDDDELDDP DMPMMDEGRQ PLSRKLPIRS SRINPYRMLI LCRLAILGLF FHYRILHPVN
0301: DAYGLWLTSV ICEIWFAVSW ILDQFPKWYP IERETYLDRL SLRYEKEGKP SGLAPVDVFV STVDPLKEPP LITANTVLSI LAVDYPVDKV ACYVSDDGAA
0401: MLTFEALSDT AEFARKWVPF CKKFNIEPRA PEWYFSQKMD YLKNKVHPAF VRERRAMKRD YEEFKVKINA LVATAQKVPE EGWTMQDGTP WPGNNVRDHP
0501: GMIQVFLGHS GVRDTDGNEL PRLVYVSREK RPGFDHHKKA GAMNSLIRVS AVLSNAPYLL NVDCDHYINN SKAIRESMCF MMDPQSGKKV CYVQFPQRFD
0601: GIDRHDRYSN RNVVFFDINM KGLDGIQGPI YVGTGCVFRR QALYGFDAPK KKKPPGKTCN CWPKWCCLCC GLRKKSKTKA KDKKTNTKET SKQIHALENV
0701: DEGVIVPVSN VEKRSEATQL KLEKKFGQSP VFVASAVLQN GGVPRNASPA CLLREAIQVI SCGYEDKTEW GKEIGWIYGS VTEDILTGFK MHCHGWRSVY
0801: CMPKRAAFKG SAPINLSDRL HQVLRWALGS VEIFLSRHCP IWYGYGGGLK WLERFSYINS VVYPWTSLPL IVYCSLPAVC LLTGKFIVPE ISNYAGILFM
0901: LMFISIAVTG ILEMQWGGVG IDDWWRNEQF WVIGGASSHL FALFQGLLKV LAGVNTNFTV TSKAADDGAF SELYIFKWTT LLIPPTTLLI INIIGVIVGV
1001: SDAISNGYDS WGPLFGRLFF ALWVIVHLYP FLKGMLGKQD KMPTIIVVWS ILLASILTLL WVRVNPFVAK GGPVLEICGL NCGN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)