AT4G39350.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cellulose synthase A2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cellulose synthase A2 (CESA2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A9 (TAIR:AT2G21770.1); Has 3166 Blast hits to 2799 proteins in 618 species: Archae - 10; Bacteria - 1096; Metazoa - 3; Fungi - 18; Plants - 1940; Viruses - 5; Other Eukaryotes - 94 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:18297078..18301890 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 122076.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.48 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 1084 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
0001: MNTGGRLIAG SHNRNEFVLI NADESARIRS VQELSGQTCQ ICGDEIELTV SSELFVACNE CAFPVCRPCY EYERREGNQA CPQCKTRYKR IKGSPRVDGD 0101: DEEEEDIDDL EYEFDHGMDP EHAAEAALSS RLNTGRGGLD SAPPGSQIPL LTYCDEDADM YSDRHALIVP PSTGYGNRVY PAPFTDSSAP PQARSMVPQK 0201: DIAEYGYGSV AWKDRMEVWK RRQGEKLQVI KHEGGNNGRG SNDDDELDDP DMPMMDEGRQ PLSRKLPIRS SRINPYRMLI LCRLAILGLF FHYRILHPVN 0301: DAYGLWLTSV ICEIWFAVSW ILDQFPKWYP IERETYLDRL SLRYEKEGKP SGLAPVDVFV STVDPLKEPP LITANTVLSI LAVDYPVDKV ACYVSDDGAA 0401: MLTFEALSDT AEFARKWVPF CKKFNIEPRA PEWYFSQKMD YLKNKVHPAF VRERRAMKRD YEEFKVKINA LVATAQKVPE EGWTMQDGTP WPGNNVRDHP 0501: GMIQVFLGHS GVRDTDGNEL PRLVYVSREK RPGFDHHKKA GAMNSLIRVS AVLSNAPYLL NVDCDHYINN SKAIRESMCF MMDPQSGKKV CYVQFPQRFD 0601: GIDRHDRYSN RNVVFFDINM KGLDGIQGPI YVGTGCVFRR QALYGFDAPK KKKPPGKTCN CWPKWCCLCC GLRKKSKTKA KDKKTNTKET SKQIHALENV 0701: DEGVIVPVSN VEKRSEATQL KLEKKFGQSP VFVASAVLQN GGVPRNASPA CLLREAIQVI SCGYEDKTEW GKEIGWIYGS VTEDILTGFK MHCHGWRSVY 0801: CMPKRAAFKG SAPINLSDRL HQVLRWALGS VEIFLSRHCP IWYGYGGGLK WLERFSYINS VVYPWTSLPL IVYCSLPAVC LLTGKFIVPE ISNYAGILFM 0901: LMFISIAVTG ILEMQWGGVG IDDWWRNEQF WVIGGASSHL FALFQGLLKV LAGVNTNFTV TSKAADDGAF SELYIFKWTT LLIPPTTLLI INIIGVIVGV 1001: SDAISNGYDS WGPLFGRLFF ALWVIVHLYP FLKGMLGKQD KMPTIIVVWS ILLASILTLL WVRVNPFVAK GGPVLEICGL NCGN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)