AT5G64740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:25881555..25886333 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 122509.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1084 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MNTGGRLIAG SHNRNEFVLI NADENARIRS VQELSGQTCQ ICRDEIELTV DGEPFVACNE CAFPVCRPCY EYERREGNQA CPQCKTRFKR LKGSPRVEGD 0101: EEEDDIDDLD NEFEYGNNGI GFDQVSEGMS ISRRNSGFPQ SDLDSAPPGS QIPLLTYGDE DVEISSDRHA LIVPPSLGGH GNRVHPVSLS DPTVAAHPRP 0201: MVPQKDLAVY GYGSVAWKDR MEEWKRKQNE KLQVVRHEGD PDFEDGDDAD FPMMDEGRQP LSRKIPIKSS KINPYRMLIV LRLVILGLFF HYRILHPVKD 0301: AYALWLISVI CEIWFAVSWV LDQFPKWYPI ERETYLDRLS LRYEKEGKPS GLSPVDVFVS TVDPLKEPPL ITANTVLSIL AVDYPVDKVA CYVSDDGAAM 0401: LTFEALSETA EFARKWVPFC KKYCIEPRAP EWYFCHKMDY LKNKVHPAFV RERRAMKRDY EEFKVKINAL VATAQKVPED GWTMQDGTPW PGNSVRDHPG 0501: MIQVFLGSDG VRDVENNELP RLVYVSREKR PGFDHHKKAG AMNSLIRVSG VLSNAPYLLN VDCDHYINNS KALREAMCFM MDPQSGKKIC YVQFPQRFDG 0601: IDRHDRYSNR NVVFFDINMK GLDGLQGPIY VGTGCVFRRQ ALYGFDAPKK KKGPRKTCNC WPKWCLLCFG SRKNRKAKTV AADKKKKNRE ASKQIHALEN 0701: IEEGRVTKGS NVEQSTEAMQ MKLEKKFGQS PVFVASARME NGGMARNASP ACLLKEAIQV ISCGYEDKTE WGKEIGWIYG SVTEDILTGF KMHSHGWRSV 0801: YCTPKLAAFK GSAPINLSDR LHQVLRWALG SVEIFLSRHC PIWYGYGGGL KWLERLSYIN SVVYPWTSLP LIVYCSLPAI CLLTGKFIVP EISNYASILF 0901: MALFSSIAIT GILEMQWGKV GIDDWWRNEQ FWVIGGVSAH LFALFQGLLK VLAGVDTNFT VTSKAADDGE FSDLYLFKWT SLLIPPMTLL IINVIGVIVG 1001: VSDAISNGYD SWGPLFGRLF FALWVIIHLY PFLKGLLGKQ DRMPTIIVVW SILLASILTL LWVRVNPFVA KGGPILEICG LDCL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)