suba logo
AT5G09870.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cellulose synthase 5
Curator
Summary (TAIR10)
Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.
Computational
Description (TAIR10)
cellulose synthase 5 (CESA5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 6 (TAIR:AT5G64740.1); Has 3218 Blast hits to 2905 proteins in 647 species: Archae - 9; Bacteria - 1207; Metazoa - 1; Fungi - 23; Plants - 1882; Viruses - 5; Other Eukaryotes - 91 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G09870-MONOMERCAZy:GT2EC:2.4.1.12eggNOG:COG1215
eggNOG:ENOG410IEP7EMBL:AB016893EMBL:AY136423EMBL:BT008832
EMBL:CP002688EnsemblPlants:AT5G09870EnsemblPlants:AT5G09870.1entrez:830847
Gene3D:3.30.40.10GeneID:830847Genevisible:Q8L778GO:GO:0005886
GO:GO:0008270GO:GO:0009833GO:GO:0010192GO:GO:0016021
GO:GO:0016760GO:GO:0030244GO:GO:0071555Gramene:AT5G09870.1
gramene_pathway:2.4.1.12gramene_pathway:PWY-1001hmmpanther:PTHR13301hmmpanther:PTHR13301:SF27
HOGENOM:HOG000241942InParanoid:Q8L778InterPro:IPR001841InterPro:IPR005150
InterPro:IPR013083InterPro:IPR027934InterPro:IPR029044iPTMnet:Q8L778
KEGG:00500+2.4.1.12KEGG:ath:AT5G09870KO:K10999ncoils:Coil
OMA:ESFVACNPaxDb:Q8L778Pfam:PF03552Pfam:PF14569
Pfam:Q8L778Pfscan:PS50089PhylomeDB:Q8L778PRIDE:Q8L778
PRO:PR:Q8L778PROSITE:PS50089ProteinModelPortal:Q8L778Proteomes:UP000006548
RefSeq:NP_196549.1SMR:Q8L778STRING:3702.AT5G09870.1SUPFAM:SSF53448
SUPFAM:SSF57850TAIR:AT5G09870tair10-symbols:CESA5TMHMM:TMhelix
UniGene:At.27671UniPathway:UPA00695UniProt:Q8L778
Coordinates (TAIR10) chr5:+:3073356..3077974
Molecular Weight (calculated) 120868.00 Da
IEP (calculated) 7.34
GRAVY (calculated) -0.21
Length 1069 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNTGGRLIAG SHNRNEFVLI NADESARIRS VEELSGQTCQ ICGDEIELSV DGESFVACNE CAFPVCRPCY EYERREGNQS CPQCKTRYKR IKGSPRVEGD
0101: EEDDGIDDLD FEFDYSRSGL ESETFSRRNS EFDLASAPPG SQIPLLTYGE EDVEISSDSH ALIVSPSPGH IHRVHQPHFP DPAAHPRPMV PQKDLAVYGY
0201: GSVAWKDRME EWKRKQNEKY QVVKHDGDSS LGDGDDADIP MMDEGRQPLS RKVPIKSSKI NPYRMLIVLR LVILGLFFHY RILHPVNDAY ALWLISVICE
0301: IWFAVSWVLD QFPKWYPIER ETYLDRLSLR YEKEGKPSEL AGVDVFVSTV DPMKEPPLIT ANTVLSILAV DYPVDRVACY VSDDGAAMLT FEALSETAEF
0401: ARKWVPFCKK YTIEPRAPEW YFCHKMDYLK NKVHPAFVRE RRAMKRDYEE FKVKINALVA TAQKVPEEGW TMQDGTPWPG NNVRDHPGMI QVFLGNNGVR
0501: DVENNELPRL VYVSREKRPG FDHHKKAGAM NSLIRVSGVL SNAPYLLNVD CDHYINNSKA LREAMCFMMD PQSGKKICYV QFPQRFDGID KSDRYSNRNV
0601: VFFDINMKGL DGLQGPIYVG TGCVFRRQAL YGFDAPKKKK TKRMTCNCWP KWCLFCCGLR KNRKSKTTDK KKKNREASKQ IHALENIEEG TKGTNDAAKS
0701: PEAAQLKLEK KFGQSPVFVA SAGMENGGLA RNASPASLLR EAIQVISCGY EDKTEWGKEI GWIYGSVTED ILTGFKMHSH GWRSVYCTPK IPAFKGSAPI
0801: NLSDRLHQVL RWALGSVEIF LSRHCPIWYG YGGGLKWLER LSYINSVVYP WTSIPLLVYC SLPAICLLTG KFIVPEISNY ASILFMALFG SIAVTGILEM
0901: QWGKVGIDDW WRNEQFWVIG GVSAHLFALF QGLLKVLAGV ETNFTVTSKA ADDGEFSELY IFKWTSLLIP PTTLLIINVI GVIVGISDAI SNGYDSWGPL
1001: FGRLFFAFWV ILHLYPFLKG LLGKQDRMPT IILVWSILLA SILTLLWVRV NPFVAKGGPI LEICGLDCL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)