AT2G40630.1::SUBA5

AT2G40630.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
nucleus 1.000
What is SUBAcon?

Predictors

External Curations

AmiGO : plastid 18431481
TAIR : plastid 18431481

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:23778966 (2013): AT4G16845.1:None: PMID:23778966 (2013): AT3G20740.1:None: PMID:23778966 (2013): AT5G15020.1:None: PMID:23778966 (2013): AT4G29000.1:None: PMID:23778966 (2013): AT1G70060.1:None: PMID:23778966 (2013): AT5G08450.1:None: PMID:23778966 (2013): AT2G41840.1:None: PMID:23778966 (2013): AT1G24190.1:None: PMID:23778966 (2013): AT1G10450.1:None: PMID:23778966 (2013): AT1G05190.1:None: PMID:23778966 (2013): AT3G24440.1:None: PMID:23778966 (2013): AT4G38130.1:None: PMID:23778966 (2013): AT4G16143.1:None: PMID:23778966 (2013): AT4G27090.1:None: PMID:23778966 (2013): AT2G32840.1:None: PMID:23778966 (2013): AT2G45250.1:None: PMID:21798944 (2011): AT5G10110.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT5G04670.1 nucleus [6.38] AT3G44530.1 nucleus [6.19] AT1G55870.1 cytosol [5.77] AT4G24200.1 nucleus [5.67] AT3G07530.1 plasma membrane [5.48] AT2G31530.1 plastid [5.32] AT4G15880.1 nucleus [5.12] AT1G72560.1 cytosol, nucleus [5.08] AT3G15010.1 nucleus [5.04] AT3G58580.1 golgi [4.78]	AT2G41840.1 cytosol AT4G27090.1 cytosol AT3G24440.1 nucleus AT5G15020.1 nucleus AT5G10110.1 nucleus AT5G08450.1 nucleus AT4G38130.1 nucleus AT4G29000.1 nucleus AT4G16845.1 nucleus AT4G16143.1 nucleus AT3G20740.1 nucleus AT2G45250.1 nucleus AT2G32840.1 nucleus AT1G70060.1 nucleus AT1G24190.1 nucleus AT1G10450.1 nucleus AT1G05190.1 plastid

Description (TAIR10)

protein_coding : Uncharacterised conserved protein (UCP030365)

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Uncharacterised conserved protein (UCP030365); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP030365 (InterPro:IPR016953); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030365) (TAIR:AT5G05240.1); Has 160 Blast hits to 153 proteins in 63 species: Archae - 0; Bacteria - 58; Metazoa - 24; Fungi - 6; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410JWTA	eggNOG:ENOG41104MR	EMBL:AC002336	EMBL:AF410292
EMBL:AY113004	EMBL:CP002685	EnsemblPlants:AT2G40630	EnsemblPlants:AT2G40630.1
entrez:818658	GeneID:818658	GO:GO:0009507	Gramene:AT2G40630.1
hmmpanther:PTHR33924	hmmpanther:PTHR33924:SF1	HOGENOM:HOG000238765	IntAct:Q94EI6
KEGG:ath:AT2G40630	ncoils:Coil	OMA:ETSMAVQ	PhylomeDB:Q94EI6
Proteomes:UP000006548	RefSeq:NP_030608.1	STRING:3702.AT2G40630.1	TAIR:AT2G40630
UniGene:At.26525	UniProt:Q94EI6

Coordinates (TAIR10)

chr2:+:16958442..16960942

Molecular Weight (calculated)

58122.00 Da

IEP (calculated)

8.93

GRAVY (calculated)

-0.67

Length

535 amino acids

Sequence (TAIR10)
(BLAST)

001: MEEQRGISSG VVSEPASNSV ISGEKRNGNG LDEKDELGSK RVKVPDLASD AKTSSLQSHG NSNSVQQPNL SSEKLSKVSK VLVAPDAEGI RRVVRENDVL
101: SKDIKPSSTV ETRTYLPKAK SISTDDNRRV VNSGKQALLE NHTVKTDDSK CRVVKNISLL KPRETTESVV SQRGAAEPSV SVPVGDKVSP FQMCSSADGS
201: LGESDSMRRW REMKRNGFLS GPLGGVAAPT STVVTTPVEV PAPKQQKNKR RGGESLKKKN DVPKKEQQLV DRFANVTAPS GLLTELNPGI INHVRTKKQV
301: CSIIEALIRS SNDDATTRER HGDFNVRDAI REDRALAFKL PSTGVSDNAI SITNPEQATS LAVEAATVAS QWLEFLQQDL SGRLSAVQDS RNRVQNILTT
401: ELPLLASSRE SSSNQANSLE MVTTNTSGDA SSDKAATETH QKRWTAKFDQ INKALYDEQR DLERSLNQVK EMQSRCNHGL RQMEEYSPFS SQSSDSSFGK
501: DGNQETSMAV QAAAASIFST CSFLLSMMKP PPTGS