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AT5G04670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Enhancer of polycomb-like transcription factor protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT4G32620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSSXeggNOG:KOG2261EMBL:AL162972EMBL:CP002688
EnsemblPlants:AT5G04670EnsemblPlants:AT5G04670.1entrez:830344GeneID:830344
GO:GO:0006351GO:GO:0006357GO:GO:0032777Gramene:AT5G04670.1
hmmpanther:PTHR14898hmmpanther:PTHR14898:SF2HOGENOM:HOG000083201InterPro:IPR019542
InterPro:IPR024943KEGG:ath:AT5G04670OMA:CCSANILPANTHER:PTHR14898
Pfam:PF10513PhylomeDB:Q9LZ30PIR:T48463PRO:PR:Q9LZ30
Proteomes:UP000006548RefSeq:NP_196087.1STRING:3702.AT5G04670.1TAIR:AT5G04670
UniGene:At.33087UniProt:Q9LZ30
Coordinates (TAIR10) chr5:-:1337998..1340884
Molecular Weight (calculated) 87759.20 Da
IEP (calculated) 10.11
GRAVY (calculated) -0.55
Length 766 amino acids
Sequence (TAIR10)
(BLAST)
001: MPSVGMRRTT RVFGVVKAAD GARVLRSGRR IWPNVGEPKV RRAHDVVDRD CDSVLKNQNK SKGNKVSSGK SNSQPCSPKQ VSSEKEDKVD DFPVTKRRKV
101: RNEGVGDEKT VDKMFGIVYS RKRKRLCEPS SSDRSEEPLR SLKFYRRRRK LSQRVSSVLT LTVDWSCEDC WFLTVFGLAM RYIRREELRL SSLASFFLSQ
201: PINQVFADHG VRFLVRSPLS SRGVCKFFGA MSCLPLFSAD FAVIPRWFMD MHFTLFVRVL PRSFFFVEKS LYLLNNPIEE SDSESELALP EPCTPRNGVV
301: VGLHPSVRAS KLTGGNAQYR GNLGSHSFQK RRSSLRRRRA RNLSHNAHKL NNGTPVFDIS GSRKNRTAAV SSKKLRSSVL SNSSPVSNGI SIIPMTKTKE
401: ELDSICCSAN ILMIHSDRCT REEGFSVMLE ASSSKEWFLV IKKDGAIRYS HMAQRTMRPF SSNRITHATV WMGGDNWKLE FCDRQDWLGF KDIYKECYER
501: NLLEQSVKVI PIPGVREVCG YAEYIDNFPS FSRPPVSYIS VNEDEVSRAM ARSIALYDMD SEDEEWLERQ NQKMLNEEDD QYLQLQREAF ELMIDGFEKY
601: HFHSPADDLL DEKAATIGSI SYLGRQEVVE AVHDYWLKKR KQRKAPLLRI FQGHQVKKTQ LLSKPVFRKR RSFKRQGSQL HGKAKQTSPW MVAVKAAEPE
701: EEDDILRMEE AKVLADKTME TAIAKRRRAQ ILAENADLAV YKAMRALRIA EAIKEAESRE VDTTVV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)