suba logo
AT1G57990.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:24030099 (2013): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17869214 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : purine permease 18
Curator
Summary (TAIR10)
Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
Computational
Description (TAIR10)
purine permease 18 (PUP18); FUNCTIONS IN: purine transmembrane transporter activity; INVOLVED IN: purine transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 17 (TAIR:AT1G57943.2); Has 332 Blast hits to 324 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 328; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:27391EMBL:AC079604EMBL:AC079991EMBL:BT000962
EMBL:CP002684EnsemblPlants:AT1G57990EnsemblPlants:AT1G57990.1entrez:842166
GeneID:842166Genevisible:Q9C508GO:GO:0005345GO:GO:0005886
GO:GO:0006863GO:GO:0016020GO:GO:0016021GO:GO:1904823
Gramene:AT1G57990.1hmmpanther:PTHR31376hmmpanther:PTHR31376:SF2HOGENOM:HOG000115800
InParanoid:Q9C508InterPro:IPR030182iPTMnet:Q9C508KEGG:ath:AT1G57990
OMA:NTRFLSFPANTHER:PTHR31376PaxDb:Q9C508Pfam:PF16913
Pfam:Q9C508PhylomeDB:Q9C508PIR:D96613PRIDE:Q9C508
PRO:PR:Q9C508PROSITE:PS00213ProteinModelPortal:Q9C508Proteomes:UP000006548
RefSeq:NP_176100.1STRING:3702.AT1G57990.1TAIR:AT1G57990tair10-symbols:ATPUP18
tair10-symbols:PUP18TCDB:2.A.7.14.2TMHMM:TMhelixUniGene:At.20872
UniProt:Q9C508
Coordinates (TAIR10) chr1:-:21441700..21442872
Molecular Weight (calculated) 44184.30 Da
IEP (calculated) 7.37
GRAVY (calculated) 0.43
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMTEASKQT TAEGSANPEP DQILSPRRSL ELKQKKWWIS VSLCIFLVLL GDSLVMLLLN FFYVQDNRED SDQDLQYRGT WLQALVQNAA FPLLIPLFFI
101: FPSPKQNQET TNTRFLSFRL ILLYISLGVL VAAHSKLFAL GKLYANFGVF TLISATQLIF TAIFAAIINR FKFTRWIILS IIGSILIYVF GSPEFGGEPD
201: ENEEFYSIQA WLTFAASVAF ALSLCLFQLC FEKVLVKTKR YGNKKVFRMV IEMQICVSFV ATVVCLVGLF ASGENKELQG DSHRFKKGET YYVLSLIGLA
301: LSWQVWAVGL MGLVLYVSGV FGDVVHMCTS PLVALFVVLA FDFMDDEFSW PRIGTLIATV VALGSYFYTL HKRNKKKMVE LYQTENNIDV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)