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AT3G59080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.501
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 2848 Blast hits to 2825 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 283; Plants - 1941; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G59080-MONOMEReggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AF424562
EMBL:AL163527EMBL:AY099818EMBL:BT000326EMBL:CP002686
EnsemblPlants:AT3G59080EnsemblPlants:AT3G59080.1entrez:825077ExpressionAtlas:Q9LYS8
Gene3D:2.40.70.10GeneID:825077GO:GO:0004190Gramene:AT3G59080.1
hmmpanther:PTHR13683hmmpanther:PTHR13683:SF250HOGENOM:HOG000237482IntAct:Q9LYS8
InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109InterPro:IPR032799
InterPro:IPR032861InterPro:IPR033121MEROPS:A01.A12OMA:LYNVENM
PANTHER:PTHR13683Pfam:PF14541Pfam:PF14543Pfscan:PS51767
PhylomeDB:Q9LYS8PIR:T47790PRINTS:PR00792PROSITE:PS00141
PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_191467.1scanprosite:PS00141
SMR:Q9LYS8STRING:3702.AT3G59080.1SUPFAM:SSF50630TAIR:AT3G59080
UniGene:At.26307UniProt:Q9LYS8
Coordinates (TAIR10) chr3:+:21836812..21838419
Molecular Weight (calculated) 59245.50 Da
IEP (calculated) 5.33
GRAVY (calculated) -0.32
Length 535 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSKYSFILC LIFFFVTAFS GDSRALAGNN EQKNISGFSG IDFPNPMRFG SASSSTSNDC GFSSPEKEPT KERTGENKTV KFHLKRRETT TTEKATTNSV
101: LELQIRDLTR IQTLHKRVLE KNNQNTVSQK QKKNDKEVVT TTPVASSVEE QAGQLVATLE SGMTLGSGEY FMDVLVGSPP KHFSLILDTG SDLNWIQCLP
201: CYDCFQQNGA FYDPKASASY KNITCNDQRC NLVSSPDPPM PCKSDNQSCP YYYWYGDSSN TTGDFAVETF TVNLTTNGGS SELYNVENMM FGCGHWNRGL
301: FHGAAGLLGL GRGPLSFSSQ LQSLYGHSFS YCLVDRNSDT NVSSKLIFGE DKDLLSHPNL NFTSFVAGKE NLVDTFYYVQ IKSILVAGEV LNIPEETWNI
401: SSDGAGGTII DSGTTLSYFA EPAYEFIKNK IAEKAKGKYP VYRDFPILDP CFNVSGIHNV QLPELGIAFA DGAVWNFPTE NSFIWLNEDL VCLAMLGTPK
501: SAFSIIGNYQ QQNFHILYDT KRSRLGYAPT KCADI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)