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AT4G24570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : dicarboxylate carrier 2
Curator
Summary (TAIR10)
Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).
Computational
Description (TAIR10)
dicarboxylate carrier 2 (DIC2); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 5 (TAIR:AT2G22500.1); Has 21371 Blast hits to 13123 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 8886; Fungi - 6458; Plants - 3905; Viruses - 0; Other Eukaryotes - 2120 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQHUeggNOG:KOG0759EMBL:AL035356EMBL:AL161561
EMBL:AM236863EMBL:AY042859EMBL:AY084853EMBL:BT008712
EMBL:CP002687EnsemblPlants:AT4G24570EnsemblPlants:AT4G24570.1entrez:828559
Gene3D:1.50.40.10GeneID:828559Genevisible:Q9SB52GO:GO:0003735
GO:GO:0005310GO:GO:0005743GO:GO:0006412GO:GO:0006835
GO:GO:0006839GO:GO:0016021Gramene:AT4G24570.1hmmpanther:PTHR24089
hmmpanther:PTHR24089:SF392HOGENOM:HOG000165139InParanoid:Q9SB52InterPro:IPR002067
InterPro:IPR018108InterPro:IPR023395iPTMnet:Q9SB52KEGG:ath:AT4G24570
KO:K13577OMA:MGVKSFVPaxDb:Q9SB52Pfam:PF00153
Pfam:Q9SB52Pfscan:PS50920PhylomeDB:Q9SB52PIR:T05577
PRIDE:Q9SB52PRINTS:PR00926PRO:PR:Q9SB52PROSITE:PS50920
ProteinModelPortal:Q9SB52Proteomes:UP000006548Reactome:R-ATH-1614517Reactome:R-ATH-428643
Reactome:R-ATH-70263RefSeq:NP_194188.1SMR:Q9SB52STRING:3702.AT4G24570.1
SUPFAM:0048588SUPFAM:SSF103506TAIR:AT4G24570tair10-symbols:DIC2
UniGene:At.20057UniGene:At.67088UniProt:Q9SB52
Coordinates (TAIR10) chr4:+:12686546..12687487
Molecular Weight (calculated) 32875.20 Da
IEP (calculated) 10.14
GRAVY (calculated) 0.25
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)