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AT1G66160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : CYS, MET, PRO, and GLY protein 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CYS, MET, PRO, and GLY protein 1 (CMPG1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 2372 Blast hits to 2357 proteins in 158 species: Archae - 0; Bacteria - 16; Metazoa - 212; Fungi - 52; Plants - 1883; Viruses - 3; Other Eukaryotes - 206 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1258-MONOMERBioCyc:ARA:GQT-1259-MONOMERBioGrid:28152EC:6.3.2.-
eggNOG:ENOG410IIC2eggNOG:ENOG410Y3P9EMBL:AC026480EMBL:AY034913
EMBL:AY063104EMBL:AY087421EMBL:CP002684EnsemblPlants:AT1G66160
EnsemblPlants:AT1G66160.1entrez:842931ExpressionAtlas:Q9C8D1Gene3D:1.25.10.10
Gene3D:3.30.40.10GeneID:842931Genevisible:Q9C8D1GO:GO:0004842
GO:GO:0010200GO:GO:0016874hmmpanther:PTHR22849hmmpanther:PTHR22849:SF52
HOGENOM:HOG000238505InParanoid:Q9C8D1InterPro:IPR003613InterPro:IPR011989
InterPro:IPR013083InterPro:IPR016024iPTMnet:Q9C8D1KEGG:ath:AT1G66160
OMA:ICETKEGPaxDb:Q9C8D1Pfam:PF04564Pfam:Q9C8D1
Pfscan:PS51698PhylomeDB:Q9C8D1PIR:D96686PRIDE:Q9C8D1
PRO:PR:Q9C8D1PROSITE:PS51698ProteinModelPortal:Q9C8D1Proteomes:UP000006548
RefSeq:NP_564866.1SMART:SM00504SMR:Q9C8D1STRING:3702.AT1G66160.1
SUPFAM:SSF48371SUPFAM:SSF57850TAIR:AT1G66160tair10-symbols:ATCMPG1
tair10-symbols:CMPG1UniGene:At.23473UniGene:At.71474UniPathway:UPA00143
UniProt:Q9C8D1
Coordinates (TAIR10) chr1:+:24637218..24638513
Molecular Weight (calculated) 48215.10 Da
IEP (calculated) 8.32
GRAVY (calculated) -0.09
Length 431 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLSLRVRRR GGSVSKKEII PVTSCSEEVE ITIPSQFQCP ISYELMKDPV IIASGITYDR ENIEKWFESG YQTCPVTNTV LTSLEQIPNH TIRRMIQGWC
101: GSSLGGGIER IPTPRVPVTS HQVSEICERL SAATRRGDYA ACMEMVTKMT RLGKESERNR KCVKENGAGL VLCVCFDAFS ENANASLLLE ETVSVLTWML
201: PIGLEGQSKL TTTSSFNRLV ELLRNGDQNA AFLIKELLEL NVTHVHALTK INGVQEAFMK SINRDSTCVN SLISIHHMIL TNQETVSRFL ELDLVNITVE
301: MLVDSENSVC EKALTVLNVI CETKEGREKV RRNKLVIPIL VKKILKISEK KDLVSVMWKV CKSGDGSEVE EALRLGAFKK LVVMLQVGCG EGTKEKVTEL
401: LKMMNKVMKM NGFVDRSYSS SIEFKHVKKP F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)