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AT1G35140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31520498 (2020): mitochondrion
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22430844 (2012): Golgi
  • PMID:16356755 (2006): extracellular region
  • PMID:16287169 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphate-responsive 1 family protein
Curator
Summary (TAIR10)
At1g35140 (At1g35140/T32G9_32) mRNA, complete cds
Computational
Description (TAIR10)
PHOSPHATE-INDUCED 1 (PHI-1); CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT4G08950.1); Has 400 Blast hits to 400 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC079605EMBL:AF324998EMBL:AY084831EMBL:CP002684
EnsemblPlants:AT1G35140EnsemblPlants:AT1G35140.1entrez:840399GeneID:840399
Genevisible:Q9C6E4GO:GO:0001666GO:GO:0005615GO:GO:0005794
GO:GO:0009505GO:GO:0040007GO:GO:0048046Gramene:AT1G35140.1
hmmpanther:PTHR31279hmmpanther:PTHR31279:SF3HOGENOM:HOG000239502InParanoid:Q9C6E4
InterPro:IPR006766KEGG:ath:AT1G35140OMA:RRSTMAQPaxDb:Q9C6E4
Pfam:PF04674Pfam:Q9C6E4PhylomeDB:Q9C6E4PIR:H86471
PRIDE:Q9C6E4PRO:PR:Q9C6E4ProteinModelPortal:Q9C6E4Proteomes:UP000006548
RefSeq:NP_174746.1STRING:3702.AT1G35140.1TAIR:AT1G35140tair10-symbols:EXL7
tair10-symbols:PHI-1UniGene:At.24168UniProt:Q9C6E4
Coordinates (TAIR10) chr1:+:12852089..12853018
Molecular Weight (calculated) 33187.50 Da
IEP (calculated) 8.92
GRAVY (calculated) -0.15
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)