AT2G41640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyltransferase family 61 protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1); Has 674 Blast hits to 674 proteins in 105 species: Archae - 0; Bacteria - 55; Metazoa - 158; Fungi - 12; Plants - 386; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:17360654..17362391 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57366.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.04 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||
| Length | 500 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVQYQRLIIH HGRKEDKFRV SSAEESGGGG CCYSKRAKQK FRCLLFLSIL SCCFVLSPYY LFGFSTLSLL DSFRREIEGL SSYEPVITPL CSEISNGTIC 101: CDRTGLRSDI CVMKGDVRTN SASSSIFLFT SSTNNNTKPE KIKPYTRKWE TSVMDTVQEL NLITKDSNKS SDRVCDVYHD VPAVFFSTGG YTGNVYHEFN 201: DGIIPLFITS QHYNKKVVFV IVEYHDWWEM KYGDVVSQLS DYPLVDFNGD TRTHCFKEAT VGLRIHDELT VNSSLVIGNQ TIVDFRNVLD RGYSHRIQSL 301: TQEETEANVT ALDFKKKPKL VILSRNGSSR AILNENLLVE LAEKTGFNVE VLRPQKTTEM AKIYRSLNTS DVMIGVHGAA MTHFLFLKPK TVFIQIIPLG 401: TDWAAETYYG EPAKKLGLKY VGYKIAPKES SLYEEYGKDD PVIRDPDSLN DKGWEYTKKI YLQGQNVKLD LRRFRETLTR SYDFSIRRRF REDYLLHRED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)