AT1G33490.1::SUBA5

AT1G33490.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31615849 (2019): plastid plastid thylakoid PMID:31520498 (2020): mitochondrion PMID:28865150 (2017): extracellular region plant-type cell wall PMID:26781341 (2016): plasma membrane PMID:24030099 (2013): plasma membrane PMID:22923678 (2012): endoplasmic reticulum PMID:21433285 (2011): plasma membrane PMID:19334764 (2009): plasma membrane	PMID:24833385 (2014): AT4G14455.1:None: PMID:24833385 (2014): AT2G41705.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT1G19570.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT1G31812.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT5G11680.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT1G29060.1:None: PMID:24833385 (2014): AT5G59650.1:None: PMID:24833385 (2014): AT4G20790.1:None: PMID:24833385 (2014): AT1G21240.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT4G30500.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT3G48890.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT3G10640.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT5G41210.1 peroxisome [7.81]
AT1G49670.1 peroxisome [6.38]
AT2G21270.1 nucleus [6.07]
AT1G65820.1 endoplasmic reticulum [5.2]
AT1G78890.1 mitochondrion [4.94]
AT3G20870.1 plasma membrane [4.94]
AT4G21580.1 peroxisome [4.94]
AT4G05530.1 peroxisome [4.9]
AT5G06130.1 plastid [4.88]
AT3G05700.1 nucleus [4.86]

AT1G31812.1 cytosol
AT1G47640.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT3G17000.1 endoplasmic reticulum
AT3G48890.1 endoplasmic reticulum
AT1G17280.1 golgi
AT4G37680.1 golgi
AT1G29060.1 golgi
AT4G30850.1 golgi
AT3G66654.1 golgi
AT4G14455.1 golgi
AT4G30500.1 endoplasmic reticulum, golgi
AT2G26180.1 nucleus
AT3G10640.1 nucleus
AT1G19570.1 peroxisome
AT4G20790.1 plasma membrane
AT2G41705.1 plasma membrane
AT1G21240.1 plasma membrane
AT5G06320.1 plasma membrane
AT5G11680.1 plasma membrane
AT5G59650.1 plasma membrane
AT5G49540.1 vacuole

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IW6R	eggNOG:ENOG410Y0M4	EMBL:AC051630	EMBL:AK117644
EMBL:CP002684	EnsemblPlants:AT1G33490	EnsemblPlants:AT1G33490.1	entrez:840243
GeneID:840243	GO:GO:0005783	GO:GO:0016021	Gramene:AT1G33490.1
hmmpanther:PTHR35102	HOGENOM:HOG000006234	InterPro:IPR018639	KEGG:ath:AT1G33490
OMA:YILFLPC	Pfam:PF09835	PhylomeDB:Q9C803	PIR:G86458
Proteomes:UP000006548	RefSeq:NP_564425.1	TAIR:AT1G33490	TMHMM:TMhelix
UniGene:At.39931	UniProt:Q9C803

Coordinates (TAIR10)

chr1:-:12150941..12152276

Molecular Weight (calculated)

18828.80 Da

IEP (calculated)

10.54

GRAVY (calculated)

0.72

Length

175 amino acids

Sequence (TAIR10)
(BLAST)

001: MAISKGRLKV WFDKKISEPL IQILRRGAEP KQLAFSAALG ITMGVFPICG VTVLLCGVAI ASLGSLCHAP TVMLANFIAT PIELSLVVPF LRLGEKITGG
101: PHFPLTSDAL KKVFTGQASR DVFLSIGNAL LGWLIAAPFV IVALYIMFLP CFKILVRKFS SVDSTAKTPT KERIA