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AT5G57360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Galactose oxidase/kelch repeat superfamily protein
Curator
Summary (TAIR10)
Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. ZTL is the F-box component of an SCF complex implicated in the degradation of TOC1.
Computational
Description (TAIR10)
ZEITLUPE (ZTL); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: LOV KELCH protein 2 (TAIR:AT2G18915.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:21086DIP:DIP-32989NeggNOG:ENOG410IKJWeggNOG:ENOG410XRGEEMBL:AB016891EMBL:AB038796EMBL:AF216525
EMBL:AF252294EMBL:AF254413EMBL:AY039902EMBL:BT008772EMBL:CP002688EnsemblPlants:AT5G57360EnsemblPlants:AT5G57360.1
entrez:835842ExpressionAtlas:Q94BT6Gene3D:2.120.10.80GeneID:835842Genevisible:Q94BT6GO:GO:0005634GO:GO:0005737
GO:GO:0009881GO:GO:0009908GO:GO:0016567GO:GO:0018298GO:GO:0048511hmmpanther:PTHR23244hmmpanther:PTHR23244:SF313
HOGENOM:HOG000238789InParanoid:Q94BT6IntAct:Q94BT6InterPro:IPR000014InterPro:IPR001810InterPro:IPR011043InterPro:IPR015915
MINT:MINT-192373PaxDb:Q94BT6Pfam:PF12937Pfam:PF13415Pfam:PF13418Pfam:PF13426Pfam:Q94BT6
Pfscan:PS50112Pfscan:PS50181PhylomeDB:Q94BT6PRIDE:Q94BT6PRO:PR:Q94BT6PROSITE:PS50112PROSITE:PS50181
ProteinModelPortal:Q94BT6Proteomes:UP000006548RefSeq:NP_568855.1SMART:SM00256SMR:Q94BT6STRING:3702.AT5G57360.2SUPFAM:0047741
SUPFAM:0052715SUPFAM:SSF50965SUPFAM:SSF55785SUPFAM:SSF81383TAIR:AT5G57360tair10-symbols:ADO1tair10-symbols:FKL2
tair10-symbols:LKP1tair10-symbols:ZTLTIGRfam:TIGR00229TIGRFAMs:TIGR00229UniGene:At.21022UniPathway:UPA00143UniProt:Q94BT6
Coordinates (TAIR10) chr5:+:23241597..23244256
Molecular Weight (calculated) 65909.90 Da
IEP (calculated) 5.38
GRAVY (calculated) -0.08
Length 609 amino acids
Sequence (TAIR10)
(BLAST)
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)