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AT4G33630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3506)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
EXECUTER1 (EX1); FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT1G27510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14786eggNOG:ENOG410IIKPeggNOG:ENOG410ZHAFEMBL:AL031394
EMBL:AL161583EMBL:AY059742EMBL:AY117173EMBL:CP002687
EnsemblPlants:AT4G33630EnsemblPlants:AT4G33630.1EnsemblPlants:AT4G33630.2entrez:829504
GeneID:829504Genevisible:Q93YW0GO:GO:0009507GO:GO:0010343
GO:GO:0042651Gramene:AT4G33630.1Gramene:AT4G33630.2hmmpanther:PTHR33917
hmmpanther:PTHR33917:SF1HOGENOM:HOG000237424InParanoid:Q93YW0InterPro:IPR001943
InterPro:IPR021894KEGG:ath:AT4G33630ncoils:CoilOMA:WWAGISE
PaxDb:Q93YW0Pfam:PF02151Pfam:PF12014Pfam:Q93YW0
PhylomeDB:Q93YW0PIR:T04980PRIDE:Q93YW0PRO:PR:Q93YW0
Proteomes:UP000006548RefSeq:NP_567929.1RefSeq:NP_849488.1STRING:3702.AT4G33630.1
TAIR:AT4G33630tair10-symbols:EX1UniGene:At.48933UniGene:At.69903
UniProt:Q93YW0
Coordinates (TAIR10) chr4:+:16155560..16159094
Molecular Weight (calculated) 76538.80 Da
IEP (calculated) 4.92
GRAVY (calculated) -0.58
Length 684 amino acids
Sequence (TAIR10)
(BLAST)
001: MPSLSTPPSQ NLAFSPAASA TSSRLTPSSK RSFYPHRLPD PTALCRCSSS SGSNSSSSSS SDDNPRWDSA IQDVLKSAIK RFDSVLSWYA TLDNDDGEQG
101: SENVEKIDDD WDWDRWKKHF DQVDDQDRLL SVLKSQLNRA IKREDYEDAA RLKVAIAATA TNDAVGKVMS TFYRALLEER YKDAVYLRDK AGAGLVGWWS
201: GISEDVKDPF GLIVQITAEH GRYVARSYNP RQLSTSAAGA PLFEIFLTLD GKGNYKKQAV YLKWKEIFPD VPTMPSRTLT PGRFLTSPGR KEDTGNLAVE
301: SSEDEESDNS DDDSDLLEES SGFQSFLRDM IPGVKVKVMK VTAPGRVDKD FISKVIEQIA DEEDEENDLD IEDIDVEDDT KAEIDEKNAD IELESVTDEI
401: IDNNGGREIA VKFVIGDIVD RLSGNQPLKE SLRSPANLES VENSSFYLRL EKDLNVKESK GVEGTTLVDG KGSRQSRRRI ENIMGDLAKS IEKEKKISVK
501: MLKDVGELLS LTLSQAQNRQ QLSGLTKFRR IDVTPSLDPL DGLYIGAHGL YTSEVIHLKR KFGQWKGGKE SKKPTDIEFY EYVEAVKLTG DPYVPAGKVA
601: FRAKIGRRYE LPHKGLIPEE FGVIARYKGQ GRLADPGFRN PRWVDGELVI LDGKYVKGGP VVGFVYWAPE YHFVMFFNRL RLQA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)