AT5G03900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Iron-sulphur cluster biosynthesis family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361); Has 138 Blast hits to 138 proteins in 58 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:1048338..1050999 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48175.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.99 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||
| Length | 429 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MACVSTCLIL SPRLTQVGLS SKKPFLIRLR SPVDRYSFPR MLTERCLSTR RKFNRHGIAV VKAASLDKVS GAIKPGGLVE SDKLPTDVRK RAMDAVDECG 101: RRVTVGDVAS RGGLKVTEAQ TALQAIAADT DGFLEVSDEG DVLYVFPRDY RTKLAAKSLR IQIEPFLEKA KGAVDYLARV SFGTALIASI VIVYTSIIAL 201: LSSKSEDDNR QRRRGRSYDS GFNFYINPVD LLWYWDPNYY NRRRAREDEG KGMNFIESVF SFVFGDGDPN QGIEEERWQM IGQYITSRGG VVAADELAPY 301: LDVPSSKSAM NDESYILPVL LRFDGQPELD EEGNILYCFP SLQRTASGSS RRKEYVGKWF DWVADMEKFF KEKKWQFSKT STSERALVIG LGAVNLFGVI 401: VLNTLLNEMS VRPGGFLTFV KNIYPLLQV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)