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AT4G35760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAD(P)H dehydrogenase (quinone)s
Curator
Summary (TAIR10)
Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.
Computational
Description (TAIR10)
NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:15011EC:1.1.4.-eggNOG:COG4243eggNOG:ENOG410IENU
EMBL:AL031135EMBL:AL161588EMBL:AY088194EMBL:AY099728
EMBL:AY128903EMBL:CP002687EnsemblPlants:AT4G35760EnsemblPlants:AT4G35760.1
entrez:829729Gene3D:3.40.30.10GeneID:829729Genevisible:Q8L540
GO:GO:0003955GO:GO:0009507GO:GO:0009535GO:GO:0009536
GO:GO:0010207GO:GO:0016021GO:GO:0048038Gramene:AT4G35760.1
hmmpanther:PTHR34573hmmpanther:PTHR34573:SF1HOGENOM:HOG000232446InParanoid:Q8L540
IntAct:Q8L540InterPro:IPR012336InterPro:IPR012932KEGG:ath:AT4G35760
MINT:MINT-8199683OMA:CPHCHEQPaxDb:Q8L540Pfam:PF07884
Pfam:Q8L540PhylomeDB:Q8L540PIR:T04681PRIDE:Q8L540
PRO:PR:Q8L540ProteinModelPortal:Q8L540Proteomes:UP000006548RefSeq:NP_567988.1
SMART:SM00756SMR:Q8L540STRING:3702.AT4G35760.1SUPFAM:SSF52833
TAIR:AT4G35760TMHMM:TMhelixUniGene:At.43284UniProt:Q8L540
Coordinates (TAIR10) chr4:-:16942733..16944622
Molecular Weight (calculated) 40403.10 Da
IEP (calculated) 4.71
GRAVY (calculated) 0.19
Length 376 amino acids
Sequence (TAIR10)
(BLAST)
001: MMARFVSVSS CQFHFGFREV SPPSVTSYPR RFEVSDRRFP AIPIKCSSSE PENGEDSAPS LSSSSSSSTS EVSTSNSSTY NWYTGIGGIG MLDTAYLTYL
101: KVTGSDAFCP IGGGTCGDVL NSDYAVVFGV PLPVIGFVMY GVVTALSAEL GEGNLPFGIS KSNGRFALFG ITTAMASASA YFLYILSTKL SGSSCLYCLV
201: SAFLSFSLFF LSVKDVKLQE IQQVVGLQIC LAIIVVASLT ASYSTAQPIP SRSGDIELPY FRTEISSSSS PYAIALAKHL NSIGAKMYGA FWCSHCLEQK
301: EMFGREAAKE LNYVECFPDG YKKGTKILKA CADAAIEGFP TWIINDKVLS GEIELAELAE MTGFSLDQAN ETNQLQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)