AT2G23390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1088 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9960568..9963476 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54312.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||
| Length | 469 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVVLSYCKP SPPLRRFHRR CGNLWKKENV RSSRRSSSVT AMFWKSNKPA EVKEFDISLR DYTLTESNIE EALENKPKQK VISLSVVSSI FEIPQAEWDA 101: CALDSSQPES YNPFLSYGFL SSLEDTGCAV RETGWMPLHI VAKDECESIL GVVPLYLKSH SYGEFVFDHS WADAYRSFGG RYYPKLQCCV PFTPVTGPRI 201: LIRDNPCKEQ VFDAIVSAMT ELASKLQVSS LHITFPSGAE WDKLKEKGFS QRIGMQYHWK NRDYKNFDEF LMDMKQSKRK NIRQERKKIG TQNLKMRRLQ 301: GDDIKARHWD SFYDFYRNTT DNKWGTPYLT RDFFHDMASK LGDKVLLVLA EENEEPVAGA LNLIGGDTLF GRLWGCRPDS YYPSLHFEAC YYQAIEAAIE 401: LNLKTVEAGA QGEHKIQRGY LPVKTYSCHY IFDEGFRQAI DEFLVRESNQ MDYVIRLMHE DGPFKEKIE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)