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AT3G10160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DHFS-FPGS homolog C
Curator
Summary (TAIR10)
Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.
Computational
Description (TAIR10)
DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink).
Protein Annotations
BRENDA:6.3.2.17EC:6.3.2.17eggNOG:COG0285eggNOG:KOG2525
EMBL:AC010927EMBL:AJ271786EMBL:BT030031EMBL:CP002686
EnsemblPlants:AT3G10160EnsemblPlants:AT3G10160.1entrez:820179Gene3D:3.40.1190.10
GeneID:820179Genevisible:F4J2K2GO:GO:0004326GO:GO:0005524
GO:GO:0005743GO:GO:0005759GO:GO:0006730GO:GO:0009853
GO:GO:0090351Gramene:AT3G10160.1gramene_pathway:6.3.2.17gramene_pathway:PWY-2161
gramene_pathway:PWY-2161B-PMNgramene_pathway:PWY-3742gramene_pathway:PWY-3841hmmpanther:PTHR11136
hmmpanther:PTHR11136:SF7HOGENOM:HOG000181278InParanoid:F4J2K2InterPro:IPR001645
InterPro:IPR004101InterPro:IPR013221InterPro:IPR018109KEGG:00790+6.3.2.17
KEGG:ath:AT3G10160KO:K01930OMA:KIFVCEKPANTHER:PTHR11136
PaxDb:F4J2K2Pfam:F4J2K2Pfam:PF08245PRIDE:F4J2K2
PRO:PR:F4J2K2PROSITE:PS01012ProteinModelPortal:F4J2K2Proteomes:UP000006548
Reactome:R-ATH-196757RefSeq:NP_187627.3scanprosite:PS01012SMR:F4J2K2
STRING:3702.AT3G10160.1SUPFAM:SSF53244SUPFAM:SSF53623TAIR:AT3G10160
tair10-symbols:ATDFCtair10-symbols:DFCtair10-symbols:FPGS2TIGRfam:TIGR01499
TIGRFAMs:TIGR01499UniGene:At.28449UniPathway:UPA00850UniProt:F4J2K2
Coordinates (TAIR10) chr3:-:3139588..3143949
Molecular Weight (calculated) 68924.50 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.12
Length 625 amino acids
Sequence (TAIR10)
(BLAST)
001: MLVCGKGFLK CRAPGVPFFC DKRKSFFTKT KRGFHSLPLG TGVRVYFNNN LRYSSNSIEV VEKAAINMGS KEDKADNPAL SSYDDAMEAL STLISRRNRG
101: DRTPTKGNRD KLEQVVTYLK ILDLEDKIKE LKVIHVAGTK GKGSTCVFSE AILRNCGFRT GMFTSPHLID VRERFRIDGL DISEEKFLQY FWECWKLLKE
201: KAVDGLTMPP LFQFLTVLAF KIFVCEKVDV AVIEVGLGGK LDSTNVIQKP VVCGIASLGM DHMDILGNTL ADIAFHKAGI FKPQIPAFTV PQLSEAMDVL
301: QKTANNLEVP LEVVAPLEPK KLDGVTLGLS GDHQLVNAGL AVSLSRCWLQ RTGNWKKIFP NESKETEIPV AFCRGLATAR LHGRAQVVHD VVSDPQDSSD
401: SMETPCGDLI FYLDGAHSPE SMEACGRWFS SAVRGDKSLS TAVNGYMRHG EYGTDLNRVS KQILLFNCME VRDPQVLLPK LVTTCASSGT HFSRALFVPS
501: MSTYNKVISG ASAIPSDTRR KDLTWQFRLQ RLWEKSIQGT DAGLDHTLKP DGITALPPHD FLCGDAPQCG GPAGTPVTSS AVMPSLPLTI NWLRDCVRRN
601: PSLKLEVLVT GSLHLVGDVL RLLKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)