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AT1G10940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute.
Computational
Description (TAIR10)
SNF1-related protein kinase 2.4 (SNRK2.4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.10 (TAIR:AT1G60940.2); Has 111412 Blast hits to 109617 proteins in 3021 species: Archae - 114; Bacteria - 12857; Metazoa - 41430; Fungi - 12032; Plants - 25317; Viruses - 521; Other Eukaryotes - 19141 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G10940-MONOMERBioCyc:ARA:GQT-746-MONOMERBioGrid:22877BRENDA:2.7.11.1
DIP:DIP-31342NEC:2.7.11.1eggNOG:COG0515eggNOG:KOG0583
EMBL:AY084221EMBL:AY093130EMBL:BT008850EMBL:CP002684
EMBL:M91548EMBL:U95973EnsemblPlants:AT1G10940EnsemblPlants:AT1G10940.1
entrez:837637ExpressionAtlas:P43291GeneID:837637Genevisible:P43291
GO:GO:0004674GO:GO:0005524hmmpanther:PTHR24343hmmpanther:PTHR24343:SF101
HOGENOM:HOG000233016InParanoid:P43291IntAct:P43291InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:P43291
ncoils:CoilPaxDb:P43291Pfam:P43291Pfam:PF00069
Pfscan:PS50011PhylomeDB:P43291PIR:S36944PRIDE:P43291
PRO:PR:P43291PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:P43291Proteomes:UP000006548Reactome:R-ATH-163680Reactome:R-ATH-200425
Reactome:R-ATH-380972RefSeq:NP_172563.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:P43291STRING:3702.AT1G10940.2SUPFAM:SSF56112
TAIR:AT1G10940tair10-symbols:ASK1tair10-symbols:SNRK2-4tair10-symbols:SNRK2.4
tair10-symbols:SRK2AUniGene:At.23750UniProt:P43291
Coordinates (TAIR10) chr1:-:3656050..3658170
Molecular Weight (calculated) 41171.00 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.47
Length 363 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKYELVKDI GAGNFGVARL MKVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFR KTIQKIMAVQ YKIPDYVHIS QDCKNLLSRI FVANSLKRIT IAEIKKHSWF LKNLPRELTE TAQAAYFKKE NPTFSLQTVE EIMKIVADAK
301: TPPPVSRSIG GFGWGGNGDA DGKEEDAEDV EEEEEEVEEE EDDEDEYDKT VKEVHASGEV RIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)