AT5G59700.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:24052613..24055102 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 91969.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 829 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGGEKFGFLI WILSIPCLIF LCYGYVPVDN YLINCGSSTN VTVTSRVFIS DNLASNFLTS PNEILAASNR NSNSDIYQTA RIFTGISKYR FSVARGRHWI 101: RLHFNPFQYQ NFQMVSAKFS VSSETHVLLS DFTVSSRVMK EYSLNVATDH LELTFTPSGD SFAFLNALEV VSVPDTLFSG DPSFAGSPGK FQGLSWQALE 201: TVYRVNMGGP RVTPSNDTLS RIWEPDSEFL VEKNLVKSVS KIASVDYVPG FATEETAPRT VYGTCTEMNS ADNPSSNFNV TWDFDVDPGF QYFLRFHFCD 301: IVSKALNQLY FNLYVDSMDV VENLDLSSYL SNTLSGAYAM DFVTGSAKLT KRIRVSIGRS SVHTDYPTAI LNGLEIMKMN NSKSQLSIGT FLPSGSSSTT 401: KKNVGMIIGL TIGSLLALVV LGGFFVLYKK RGRDQDGNSK TWIPLSSNGT TSSSNGTTLA SIASNSSYRI PLVAVKEATN SFDENRAIGV GGFGKVYKGE 501: LHDGTKVAVK RANPKSQQGL AEFRTEIEML SQFRHRHLVS LIGYCDENNE MILVYEYMEN GTLKSHLYGS GLLSLSWKQR LEICIGSARG LHYLHTGDAK 601: PVIHRDVKSA NILLDENLMA KVADFGLSKT GPEIDQTHVS TAVKGSFGYL DPEYFRRQQL TEKSDVYSFG VVMFEVLCAR PVIDPTLTRE MVNLAEWAMK 701: WQKKGQLEHI IDPSLRGKIR PDSLRKFGET GEKCLADYGV DRPSMGDVLW NLEYALQLQE AVVDGDPEDS TNMIGELPLR FNDYNHGDTS VNFSVAKEGR 801: FDEEESSVDD SSGVSMSKVF SQLIKSEGR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)