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AT2G31230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ethylene-responsive element binding factor 15
Curator
Summary (TAIR10)
encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Computational
Description (TAIR10)
ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink).
Protein Annotations
BioGrid:3028eggNOG:ENOG410J3V6eggNOG:ENOG41124AAEMBL:AC006593
EMBL:AY070443EMBL:AY096563EMBL:CP002685EnsemblPlants:AT2G31230
EnsemblPlants:AT2G31230.1entrez:817680Gene3D:3.30.730.10GeneID:817680
Genevisible:Q8VYM0GO:GO:0003677GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0006952GO:GO:0009507GO:GO:0009873
GO:GO:0010200Gramene:AT2G31230.1hmmpanther:PTHR31190hmmpanther:PTHR31190:SF3
HOGENOM:HOG000237624InParanoid:Q8VYM0InterPro:IPR001471InterPro:IPR016177
KEGG:ath:AT2G31230OMA:MEYSQSSPaxDb:Q8VYM0Pfam:PF00847
Pfam:Q8VYM0Pfscan:PS51032PhylomeDB:Q8VYM0PIR:B84718
PRIDE:Q8VYM0PRINTS:PR00367PRO:PR:Q8VYM0PROSITE:PS51032
ProteinModelPortal:Q8VYM0Proteomes:UP000006548RefSeq:NP_850162.1SMART:SM00380
SMR:Q8VYM0STRING:3702.AT2G31230.1SUPFAM:SSF54171TAIR:AT2G31230
tair10-symbols:ATERF15tair10-symbols:ERF15UniGene:At.28356UniProt:Q8VYM0
Coordinates (TAIR10) chr2:-:13306676..13307407
Molecular Weight (calculated) 27057.00 Da
IEP (calculated) 4.82
GRAVY (calculated) -0.72
Length 243 amino acids
Sequence (TAIR10)
(BLAST)
001: MEYSQSSMYS SPSSWSSSQE SLLWNESCFL DQSSEPQAFF CPNYDYSDDF FSFESPEMMI KEEIQNGDVS NSEEEEKVGI DEERSYRGVR KRPWGKFAAE
101: IRDSTRNGIR VWLGTFDKAE EAALAYDQAA FATKGSLATL NFPVEVVRES LKKMENVNLH DGGSPVMALK RKHSLRNRPR GKKRSSSSSS SSSNSSSCSS
201: SSSTSSTSRS SSKQSVVKQE SGTLVVFEDL GAEYLEQLLM SSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)