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AT5G63320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nuclear protein X1
Curator
Summary (TAIR10)
Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.
Computational
Description (TAIR10)
nuclear protein X1 (NPX1); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1); Has 56532 Blast hits to 31648 proteins in 1460 species: Archae - 252; Bacteria - 12487; Metazoa - 21575; Fungi - 5023; Plants - 2623; Viruses - 288; Other Eukaryotes - 14284 (source: NCBI BLink).
Protein Annotations
BioGrid:21695eggNOG:COG5076eggNOG:KOG1474EMBL:AB023035
EMBL:BT015056EMBL:BT021130EMBL:CP002688EnsemblPlants:AT5G63320
EnsemblPlants:AT5G63320.1entrez:836452Gene3D:1.20.920.10GeneID:836452
Genevisible:Q9FGW9GO:GO:0005634GO:GO:0006351GO:GO:0009409
GO:GO:0009651GO:GO:0009737GO:GO:0009738GO:GO:0045892
GO:GO:0051365hmmpanther:PTHR22880hmmpanther:PTHR22880:SF156HOGENOM:HOG000242557
InParanoid:Q9FGW9InterPro:IPR001487InterPro:IPR027353KEGG:ath:AT5G63320
ncoils:CoilOMA:QEDEKSIPaxDb:Q9FGW9Pfam:PF00439
Pfam:PF17035Pfam:Q9FGW9Pfscan:PS50014Pfscan:PS51525
PhylomeDB:Q9FGW9PRIDE:Q9FGW9PRINTS:PR00503PRO:PR:Q9FGW9
PROSITE:PS50014PROSITE:PS51525ProteinModelPortal:Q9FGW9Proteomes:UP000006548
RefSeq:NP_001154792.1RefSeq:NP_001154793.1RefSeq:NP_201137.5SMART:SM00297
SMR:Q9FGW9STRING:3702.AT5G63320.1SUPFAM:SSF47370TAIR:AT5G63320
tair10-symbols:NPX1UniGene:At.29003UniProt:Q9FGW9
Coordinates (TAIR10) chr5:-:25374413..25378783
Molecular Weight (calculated) 118979.00 Da
IEP (calculated) 4.43
GRAVY (calculated) -1.08
Length 1061 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGKARKHSRG RPSGFVPDYM QAVEPDEFVY SERMNSEASP PLKRRRFGLN GDNNGVSKEV LSLSKMSRSE RKNLVHKLKM ELQQVRDLSK KIASFSSDTV
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)