AT4G30780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14990523..14992855 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64577.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.72 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEMRKSGGL RPESESAARC RDELPVKLEI AEDDLEEEHG PLNKRSRLWS PGTSSSTMAP AKYNPLDEPS PLGLSLKKSP SLLELIQMKI THCGDPKAAE 101: TLKAGALGSG LKRESKTIAA AASVGPTLAP GSIEKLKASN FPASLLKIGQ WEYKSRYEGD LVAKCYFAKH KLVWEVLEQG LKSKIEIQWS DIMALKANCP 201: EDGPGTLTLV LARQPLFFRE TNPQPRKHTL WQATSDFTDG QASMNRQHFL QCAQGIMNKH FEKLVQCDHR LFHLSRQPEI AIDSPYFDAR QSIFEDPSES 301: KGHPFGNLNL STGPSISGTQ NLASPVGAQS SSEHMYLSHE APSPSSVIDA RANEGIGGSE AVNSRNRTDC GQIEAPGIHQ SMSLSDFLAV LCDTKNTTDL 401: NLADDVDGLH QSMSVSDFVA YLSDSRNITD SDQIKVPGLH QSMSVSDFVG LLSDSAGGSH PEHMEKFEIM KQQLLSDNIQ FEAPDEKSLM PRVNSLFNLL 501: YKDPNVAANS QLNTEMSVGL KSEPKGIVSD NNNNNNNNNR VLDTASSSKP QGMLRKDSFS DLLLHLPRIT SLPKFLSNIS EEDGDAYNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)