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AT3G46290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 19383785
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
TAIR : plasma membrane 19383785
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : hercules receptor kinase 1
Curator
Summary (TAIR10)
Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.
Computational
Description (TAIR10)
hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G46290-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:KOG1187
EMBL:AL133298EMBL:AL355775EMBL:CP002686EnsemblPlants:AT3G46290
EnsemblPlants:AT3G46290.1entrez:823774Gene3D:2.60.120.200GeneID:823774
Genevisible:Q9LX66GO:GO:0004672GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0009506GO:GO:0009741GO:GO:0009826
GO:GO:0016021Gramene:AT3G46290.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF94
HOGENOM:HOG000238317InParanoid:Q9LX66InterPro:IPR000719InterPro:IPR001245
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788iPTMnet:Q9LX66KEGG:ath:AT3G46290OMA:CICHGFT
PaxDb:Q9LX66Pfam:PF07714Pfam:PF12819Pfam:Q9LX66
Pfscan:PS50011PhylomeDB:Q9LX66PIR:T45686PIR:T49270
PRIDE:Q9LX66PRO:PR:Q9LX66PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9LX66Proteomes:UP000006548RefSeq:NP_190214.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9LX66
STRING:3702.AT3G46290.1SUPFAM:SSF56112TAIR:AT3G46290tair10-symbols:HERK1
TMHMM:TMhelixUniGene:At.546UniGene:At.69879UniProt:Q9LX66
Coordinates (TAIR10) chr3:+:17013009..17015501
Molecular Weight (calculated) 91472.60 Da
IEP (calculated) 6.25
GRAVY (calculated) -0.18
Length 830 amino acids
Sequence (TAIR10)
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)