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AT5G51600.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Microtubule associated protein (MAP65/ASE1) family protein
Curator
Summary (TAIR10)
Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.
Computational
Description (TAIR10)
PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink).
Protein Annotations
BioGrid:20479eggNOG:ENOG410YZBKeggNOG:KOG4302EMBL:AB018109
EMBL:CP002688EnsemblPlants:AT5G51600EnsemblPlants:AT5G51600.1entrez:835234
GeneID:835234Genevisible:Q9FHM4GO:GO:0000226GO:GO:0000280
GO:GO:0000911GO:GO:0005634GO:GO:0005874GO:GO:0007067
GO:GO:0008017GO:GO:0009524GO:GO:0009574GO:GO:0009624
GO:GO:0046785GO:GO:0052096GO:GO:0055028Gramene:AT5G51600.1
hmmpanther:PTHR19321hmmpanther:PTHR19321:SF7HOGENOM:HOG000238749InParanoid:Q9FHM4
IntAct:Q9FHM4InterPro:IPR007145KEGG:ath:AT5G51600KO:K16732
ncoils:CoilOMA:IEAHISTPANTHER:PTHR19321PaxDb:Q9FHM4
Pfam:PF03999Pfam:Q9FHM4PhylomeDB:Q9FHM4PRIDE:Q9FHM4
PRO:PR:Q9FHM4ProteinModelPortal:Q9FHM4Proteomes:UP000006548RefSeq:NP_199973.1
SMR:Q9FHM4STRING:3702.AT5G51600.1TAIR:AT5G51600tair10-symbols:ATMAP65-3
tair10-symbols:MAP65-3tair10-symbols:PLEUniGene:At.29670UniProt:Q9FHM4
Coordinates (TAIR10) chr5:-:20961061..20964080
Molecular Weight (calculated) 80306.60 Da
IEP (calculated) 5.91
GRAVY (calculated) -0.54
Length 707 amino acids
Sequence (TAIR10)
(BLAST)
001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)