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AT3G22370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alternative oxidase 1A
Curator
Summary (TAIR10)
Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.
Computational
Description (TAIR10)
alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT3G22370-MONOMERBioGrid:7138EC:1.10.3.11eggNOG:ENOG410IIJ8
eggNOG:ENOG410YFEHEMBL:AB022215EMBL:AF370166EMBL:AJ131392
EMBL:AY059128EMBL:CP002686EMBL:D89875EMBL:M96417
EMBL:U85244EnsemblPlants:AT3G22370EnsemblPlants:AT3G22370.1entrez:821806
GeneID:821806Genevisible:Q39219GO:GO:0005739GO:GO:0005743
GO:GO:0009409GO:GO:0009916GO:GO:0016021GO:GO:0031930
GO:GO:0045333GO:GO:0046872GO:GO:0070469Gramene:AT3G22370.1
gramene_pathway:1.-.-.-gramene_pathway:PWY-4302hmmpanther:PTHR31803hmmpanther:PTHR31803:SF4
HOGENOM:HOG000178442InParanoid:Q39219IntAct:Q39219InterPro:IPR002680
KEGG:ath:AT3G22370KO:K17893OMA:WGVEPNKPaxDb:Q39219
Pfam:PF01786Pfam:Q39219PhylomeDB:Q39219PIR:A46364
PIR:T51615PIRSF:PIRSF005229PRIDE:Q39219PRO:PR:Q39219
ProteinModelPortal:Q39219Proteomes:UP000006548RefSeq:NP_188876.1SMR:Q39219
STRING:3702.AT3G22370.1SwissPalm:Q39219TAIR:AT3G22370tair10-symbols:AOX1A
tair10-symbols:ATAOX1AUniGene:At.23475UniProt:Q39219
Coordinates (TAIR10) chr3:+:7906890..7908416
Molecular Weight (calculated) 39982.00 Da
IEP (calculated) 8.71
GRAVY (calculated) -0.33
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)