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AT2G37630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22822207 (2012): nucleus nuclear matrix
FP Images

7-day old Arabidopsis seedling (no marker)

RFP-At2g37630
(full-length)
overlay

SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : myb-like HTH transcriptional regulator family protein
Curator
Summary (TAIR10)
Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.
Computational
Description (TAIR10)
ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink).
Protein Annotations
BioGrid:3684eggNOG:COG5147eggNOG:KOG0048EMBL:AC004684
EMBL:AF175996EMBL:AY519578EMBL:BT026027EMBL:CP002685
EnsemblPlants:AT2G37630EnsemblPlants:AT2G37630.1entrez:818340Gene3D:1.10.10.60
GeneID:818340Genevisible:O80931GO:GO:0000793GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0005730GO:GO:0006351
GO:GO:0008356GO:GO:0009615GO:GO:0009651GO:GO:0009733
GO:GO:0009739GO:GO:0009751GO:GO:0009753GO:GO:0009944
GO:GO:0009965GO:GO:0010338GO:GO:0042742GO:GO:0042803
GO:GO:0045088GO:GO:0045892GO:GO:0046686GO:GO:0050832
Gramene:AT2G37630.1hmmpanther:PTHR10641hmmpanther:PTHR10641:SF457HOGENOM:HOG000244041
InParanoid:O80931IntAct:O80931InterPro:IPR001005InterPro:IPR009057
InterPro:IPR017930InterPro:IPR031055KEGG:ath:AT2G37630KO:K09422
ncoils:CoilOMA:CRRREKMPANTHER:PTHR10641:SF457PaxDb:O80931
Pfam:O80931Pfam:PF13921Pfscan:PS51294PhylomeDB:O80931
PIR:T02529PRIDE:O80931PRO:PR:O80931PROSITE:PS51294
ProteinModelPortal:O80931Proteomes:UP000006548RefSeq:NP_181299.1SMART:SM00717
SMR:O80931STRING:3702.AT2G37630.1SUPFAM:SSF46689TAIR:AT2G37630
tair10-symbols:AS1tair10-symbols:ATMYB91tair10-symbols:ATPHANtair10-symbols:MYB91
UniGene:At.11577UniProt:O80931
Coordinates (TAIR10) chr2:-:15781798..15782901
Molecular Weight (calculated) 42245.40 Da
IEP (calculated) 9.55
GRAVY (calculated) -0.90
Length 367 amino acids
Sequence (TAIR10)
(BLAST)
001: MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW
101: EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT
201: LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE
301: IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI RLTKFLEQQM GCRLDRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)