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AT5G66870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ASYMMETRIC LEAVES 2-like 1
Curator
Summary (TAIR10)
Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.
Computational
Description (TAIR10)
ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK7DeggNOG:ENOG410YGE6EMBL:AB010700EMBL:AB164303
EMBL:AB473834EMBL:AK228533EMBL:BT044058EMBL:CP002688
EnsemblPlants:AT5G66870EnsemblPlants:AT5G66870.1entrez:836821GeneID:836821
GO:GO:0006355GO:GO:0009954GO:GO:0009965GO:GO:0048441
Gramene:AT5G66870.1hmmpanther:PTHR31301hmmpanther:PTHR31301:SF5HOGENOM:HOG000074324
InParanoid:Q9FKZ3IntAct:Q9FKZ3InterPro:IPR004883InterPro:IPR017414
KEGG:ath:AT5G66870ncoils:CoilOMA:HHEAQLFPaxDb:Q9FKZ3
Pfam:PF03195Pfam:Q9FKZ3Pfscan:PS50891PhylomeDB:Q9FKZ3
PIRSF:PIRSF038155PRO:PR:Q9FKZ3PROSITE:PS50891ProteinModelPortal:Q9FKZ3
Proteomes:UP000006548RefSeq:NP_201488.1STRING:3702.AT5G66870.1TAIR:AT5G66870
tair10-symbols:ASL1tair10-symbols:LBD36UniGene:At.28843UniProt:Q9FKZ3
Coordinates (TAIR10) chr5:+:26706621..26707562
Molecular Weight (calculated) 34525.40 Da
IEP (calculated) 7.13
GRAVY (calculated) -0.58
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSSPCAA CKFLRRKCTQ ECVFAPYFPP DQPQKFAFVH KVFGASNVAK LLNELASNQR EDAVNSLFYE AEARLRDPVY GCVGLISILQ HRLKQVNHDL
101: ENAKKELATY VGPQAMLPIL QPHFMSLPPQ PQRPSSSSAS VLTQHHHNLL PMMAIPTGQL YHQQQQQIFE AQQLAAVARE QQNEMFRAYG GGGGSSSPHH
201: QNQAQAEILR FNNGFDSVPA GSVTVTGFNQ LSSGGTAVTG MSLGGNFVDS PSTNNNYHTD QQLHHHHQPQ QHHEAQLFIP SQSSQPLPLQ TQETQTQTQP
301: NSESEEGRRN VIG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)