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AT5G51760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.
Computational
Description (TAIR10)
ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G51760-MONOMERBioGrid:20495DIP:DIP-48990NEC:3.1.3.16
eggNOG:COG0631eggNOG:KOG0698EMBL:AB010074EMBL:CP002688
EnsemblPlants:AT5G51760EnsemblPlants:AT5G51760.1entrez:835250Gene3D:3.60.40.10
GeneID:835250Genevisible:Q9FLI3GO:GO:0004722GO:GO:0009737
GO:GO:0046872Gramene:AT5G51760.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF219
HOGENOM:HOG000233896InParanoid:Q9FLI3IntAct:Q9FLI3InterPro:IPR000222
InterPro:IPR001932InterPro:IPR015655iPTMnet:Q9FLI3KEGG:ath:AT5G51760
KO:K14497ncoils:CoilOMA:CRCPLSGPANTHER:PTHR13832
PaxDb:Q9FLI3Pfam:PF00481Pfam:Q9FLI3Pfscan:PS51746
PhylomeDB:Q9FLI3PRIDE:Q9FLI3PRO:PR:Q9FLI3PROSITE:PS01032
PROSITE:PS51746ProteinModelPortal:Q9FLI3Proteomes:UP000006548RefSeq:NP_199989.1
scanprosite:PS01032SMART:SM00332SMR:Q9FLI3STRING:3702.AT5G51760.1
SUPFAM:SSF81606TAIR:AT5G51760tair10-symbols:AHG1UniGene:At.43187
UniProt:Q9FLI3
Coordinates (TAIR10) chr5:+:21026916..21028912
Molecular Weight (calculated) 46045.40 Da
IEP (calculated) 5.29
GRAVY (calculated) -0.51
Length 416 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEIYRTIST GRGDDVSPTK CRERRRRRIE MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG
101: EETEDEPLYG IVSVMGRSRK MEDSVTVKPN LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF
201: KRMDEMATST CVCGTSVPLC NCDPREAAIS GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA
301: TSRAIGDRYL KPMVAWEPEV TFMRRESGDE CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS
401: SDNISVVVID LKNSSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)