AT2G42000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.963 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant EC metallothionein-like protein, family 15 | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant EC metallothionein-like protein, family 15; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Plant EC metallothionein-like protein, family 15 (InterPro:IPR000316); BEST Arabidopsis thaliana protein match is: Plant EC metallothionein-like protein, family 15 (TAIR:AT2G23240.2); Has 260 Blast hits to 219 proteins in 71 species: Archae - 0; Bacteria - 4; Metazoa - 85; Fungi - 6; Plants - 116; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:17529410..17529828 | ||||||||||||||||
| Molecular Weight (calculated) | 11807.00 Da | ||||||||||||||||
| IEP (calculated) | 7.76 | ||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||
| Length | 115 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVHSTYHVSF CTAQCLYISE CGRGTLRLKT KMADTGKGSS VAGCNDSCGC PSPCPGGNSC RCRMREASAG DQGHMVCPCG EHCGCNPCNC PKTQTQTSAK 101: GCTCGEGCTC ASCAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)