AT2G05580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycine-rich protein family | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycine-rich protein family; LOCATED IN: endomembrane system; Has 461494 Blast hits to 65250 proteins in 2955 species: Archae - 1131; Bacteria - 108804; Metazoa - 177058; Fungi - 32939; Plants - 47988; Viruses - 6940; Other Eukaryotes - 86634 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:2055578..2056563 | ||||||||||||||||||||
| Molecular Weight (calculated) | 26009.60 Da | ||||||||||||||||||||
| IEP (calculated) | 10.64 | ||||||||||||||||||||
| GRAVY (calculated) | -0.99 | ||||||||||||||||||||
| Length | 302 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKMNSRALIV WFLLLSAVFA IKVVASIDDT KQVGENQVEE SKSTCKYGNC AQYGENHFVE TDEVLDGEEE EESKNNQGGI GRGQGGQKGG GGGGQGGQKG 101: GGGGGQGGQK GGGGGQGGQK GGGGGQGGQK GGGGGGQGGQ KGGGGGGQGG QKGGGGGGQG GQKGGGGQGG QKGGGGQGGQ KGGGGQGGQK GGGGRGQGGM 201: KGGGGGGQGG HKGGGGGGGQ GGHKGGGGGG GQGGHKGGGG GGQGGGGHKG GGGGQGGHKG GGGGGHVGGG GRGGGGGGRG GGGSGGGGGG GSGRGGGGGG 301: GM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)