AT5G35660.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
|
||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : Glycine-rich protein family | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
Glycine-rich protein family; LOCATED IN: endomembrane system; Has 242106 Blast hits to 44248 proteins in 2411 species: Archae - 458; Bacteria - 59126; Metazoa - 88892; Fungi - 17902; Plants - 27548; Viruses - 3419; Other Eukaryotes - 44761 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:13852609..13853717 | ||||||||||||||||||||
| Molecular Weight (calculated) | 31630.70 Da | ||||||||||||||||||||
| IEP (calculated) | 8.05 | ||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||
| Length | 343 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVVKMNTKTF IVWFLLVAAV VVAVAAETSV DDKKQGEKQV EIPTVEGKND AKDSLNKGDV GVEATVEKEE ENNYEIDQHG GGWKGGGGHG GGWKGGGGHG 101: GGWKGGGGHG GGWKGGGGHG GGWKGGGGGR GGGGGGGAEL ETVEIDSASD EDVQNYRGGH GGGWKEGGGQ GGGWKGGGGQ GGGWKGGGGQ GGGWKGGGGQ 201: GGGWKGGGGQ GGGWKGGGGQ GGGWKGGGGR GGGGGGGAEL ENEEINGASE EIQWQGGGGG HGGGWQGGGG GHGGGWQGGG GGHGGGWQGG GGRGGGWKGG 301: GGHGGGWQGG GGRGGGWKGG GGGGGWRGGG GGGGWRGGGG GGG |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)