AT1G79000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : histone acetyltransferase of the CBP family 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29716933..29723984 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 190055.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.51 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.74 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1697 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MNVQAHMSGQ VSNQGTMSQQ NGNSQMQNLV GGGSAPATGA GLGPSRVSPV DNDILKLRQA MRIRIFNILQ QKQPSPADEA SKAKYMDVAR RLEEGLFKIA 0101: NTKEDYVNPS TLEPRLASLI KGRQLNNYNQ RHANSSSVGT MIPTPGLQHS GGNPNLMITS SGDATMAGSN NITTSAMNTG NLLNSGGMLG GNLSNGYQHS 0201: SSNFGLGSGG NMSSMSSQRN TGQMMPTPGF VNSSTNNNSN NGQSYLSVEA SNNSGGFSTA PMMVPQTQQQ QLRQDIGGQN SRMLQNHGSQ MGVGLRPGMQ 0301: QKLSNVSNSS INGGVGMNAK SVDSGTSYTN PIRNSQQAYD NLQRSGMQGD GYGTNNSDPF GSGNLYGAVT SVGMMTNTQN ANTASFQAVS RTSSSLSHQQ 0401: QQFQQQPNRF QQQPNQFHQQ QQQFLHQQQL KQQSQQQQRF ISHDAFGQNN VASDMVTHVK HEPGMENPSE SIHSQTPEQF QLSQFQNQYQ NNAEDRHAGS 0501: QILPVTSQSD MCTSVPQNSQ QIQQMLHPHS MASDSVNGFS NLSVGVKTES GMRGHWQSQS QEHTQMSNSM SNERHIQEDF RQRMSGTDEA QPNNMSGGSI 0601: IGQNRVSTTS ESLNPQNPTA TTCRNGNGNR DPRFKNQQKW LLFLRHARHC KAPEGKCPDR NCVTVQKLWK HMDSCAAPQC SYPRCLPTKT LINHHRSCKE 0701: PNCPVCIPVK AYLQQQANAR SLARLKNETD AARSVNGGGI SSDAVQTSAG AKSCTSPGAD ISGHLQPSLK RLKVEQSSQP VDVETESCKS SVVSVTEAQS 0801: SQYAERKDHK HSDVRAPSKY FEVKAEVSDF SVQTRPGFKD TKIGIAENIP KQRPVSQPDK QDLSDVSPMQ ETTKVEKEPE SLKKENLAES TEHTSKSGKP 0901: EIKGVSLTEL FTPEQVREHI RGLRQWVGQS KAKAEKNQAM EHSMSENSCQ LCAVEKLTFE PPPIYCTPCG ARIKRNAMYY TVGAGDTRHY FCIPCYNESR 1001: GDTILAEGTP MPKARLEKKK NDEETEEWWV QCDKCEAWQH QICALFNGRR NDGGQAEYTC PYCFIAEVEQ SKRKPLPQSA VLGAKDLPRT ILSDHIEQRL 1101: FKRLKQERTE RARAQGKSYD EIPTAESLVI RVVSSVDKKL EVKPRFLEIF REDSYPTEFA YKSKVVLLFQ KIEGVEVCLF GMYVQEFGSE CAFPNQRRVY 1201: LSYLDSVKYF RPEVRSYNGE ALRTFVYHEI LIGYLEYCKL RGFTSCYIWA CPPLKGEDYI LYCHPEIQKT PKSDKLREWY LAMLRKASKE GIVAETINLY 1301: DHFFMQTGEC RAKVTAARLP YFDGDYWPGA AEDLIYQMSQ EEDGRKGNKK GMLKKTITKR ALKASGQTDL SGNASKDLLL MHRLGETIHP MKEDFIMVHL 1401: QPSCTHCCIL MVSGNRWVCS QCKHFQICDK CYEAEQRRED RERHPVNFKD KHALYPVEIM DIPADTRDKD EILESEFFDT RQAFLSLCQG NHYQYDTLRR 1501: AKHSSMMVLY HLHNPTAPAF VTTCNACHLD IETGQGWRCE VCPDYDVCNA CFSRDGGVNH PHKLTNHPSL ADQNAQNKEA RQLRVLQLRK MLDLLVHASQ 1601: CRSAHCQYPN CRKVKGLFRH GINCKVRASG GCVLCKKMWY LLQLHARACK ESECHVPRCR DLKEHLRRLQ QQSDSRRRAA VMEMMRQRAA EVAGGSG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)