AT1G16710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : histone acetyltransferase of the CBP family 12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1); Has 5603 Blast hits to 4159 proteins in 302 species: Archae - 0; Bacteria - 235; Metazoa - 1739; Fungi - 482; Plants - 447; Viruses - 18; Other Eukaryotes - 2682 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5714692..5721782 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 190282.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.47 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1706 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MNVQAHMSGQ RSGQVPNQGT VPQNNGNSQM QNLVGSNGAA TAVTGAGAAT GSGTGVRPSR NIVGAMDHDI MKLRQYMQTL VFNMLQQRQP SPADAASKAK 0101: YMDVARRLEE GLFKMAVTKE DYMNRSTLES RITSLIKGRQ INNYNQRHAN SSSVGTMIPT PGLSQTAGNP NLMVTSSVDA TIVGNTNITS TALNTGNPLI 0201: AGGMHGGNMS NGYQHSSRNF SLGSGGSMTS MGAQRSTAQM IPTPGFVNSV TNNNSGGFSA EPTIVPQSQQ QQQRQHTGGQ NSHMLSNHMA AGVRPDMQSK 0301: PSGAANSSVN GDVGANEKIV DSGSSYTNAS KKLQQGNFSL LSFCPDDLIS GQHIESTFHI SGEGYSTTNP DPFDGAITSA GTGTKAHNIN TASFQPVSRV 0401: NSSLSHQQQF QQPPNRFQQQ PNQIQQQQQQ FLNQRKLKQQ TPQQHRLISN DGLGKTQVDS DMVTKVKCEP GMENKSQAPQ SQASERFQLS QLQNQYQNSG 0501: EDCQADAQLL PVESQSDICT SLPQNSQQIQ QMMHPQNIGS DSSNSFSNLA VGVKSESSPQ GQWPSKSQEN TLMSNAISSG KHIQEDFRQR ITGMDEAQPN 0601: NLTEGSVIGQ NHTSTISESH NLQNSIGTTC RYGNVSHDPK FKNQQRWLLF LRHARSCKPP GGRCQDQNCV TVQKLWSHMD NCADPQCLYP RCRHTKALIG 0701: HYKNCKDPRC PVCVPVKTYQ QQANVRALAR LKNESSAVGS VNRSVVSNDS LSANAGAVSG TPRCADTLDN LQPSLKRLKV EQSFQPVVPK TESCKSSIVS 0801: TTEADLSQDA ERKDHRPLKS ETMEVKVEIP DNSVQAGFGI KETKSEPFEN VPKPKPVSEP GKHGLSGDSP KQENIKMKKE PGWPKKEPGC PKKEELVESP 0901: ELTSKSRKPK IKGVSLTELF TPEQVREHIR GLRQWVGQSK AKAEKNQAME NSMSENSCQL CAVEKLTFEP PPIYCTPCGA RIKRNAMYYT VGGGETRHYF 1001: CIPCYNESRG DTILAEGTSM PKAKLEKKKN DEEIEESWVQ CDKCQAWQHQ ICALFNGRRN DGGQAEYTCP YCYVIDVEQN ERKPLLQSAV LGAKDLPRTI 1101: LSDHIEQRLF KRLKQERTER ARVQGTSYDE IPTVESLVVR VVSSVDKKLE VKSRFLEIFR EDNFPTEFPY KSKVVLLFQK IEGVEVCLFG MYVQEFGSEC 1201: SNPNQRRVYL SYLDSVKYFR PDIKSANGEA LRTFVYHEIL IGYLEYCKLR GFTSCYIWAC PPLKGEDYIL YCHPEIQKTP KSDKLREWYL AMLRKAAKEG 1301: IVAETTNLYD HFFLQTGECR AKVTAARLPY FDGDYWPGAA EDIISQMSQE DDGRKGNKKG ILKKPITKRA LKASGQSDFS GNASKDLLLM HKLGETIHPM 1401: KEDFIMVHLQ HSCTHCCTLM VTGNRWVCSQ CKDFQLCDGC YEAEQKREDR ERHPVNQKDK HNIFPVEIAD IPTDTKDRDE ILESEFFDTR QAFLSLCQGN 1501: HYQYDTLRRA KHSSMMVLYH LHNPTAPAFV TTCNVCHLDI ESGLGWRCEV CPDYDVCNAC YKKEGCINHP HKLTTHPSLA DQNAQNKEAR QLRVLQLRKM 1601: LDLLVHASQC RSPVCLYPNC RKVKGLFRHG LRCKVRASGG CVLCKKMWYL LQLHARACKE SECDVPRCGD LKEHLRRLQQ QSDSRRRAAV MEMMRQRAAE 1701: VAGTSG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)