AT1G31760.1::SUBA5

AT1G31760.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
mitochondrion 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
PMID:22797472 (2012): mitochondrion	PMID:31520498 (2020): mitochondrion PMID:23750852 (2013): mitochondrion	PMID:20706207 (2010): AT5G07310.1:None: PMID:20706207 (2010): AT3G11630.1:None: PMID:20706207 (2010): AT4G26870.1:None: PMID:20706207 (2010): AT5G64960.1:None: PMID:20706207 (2010): AT2G05830.1:None: PMID:20706207 (2010): AT4G13850.1:None: PMID:20706207 (2010): AT1G56110.1:None: PMID:20706207 (2010): AT2G23350.1:None: PMID:20706207 (2010): AT1G14810.1:None: PMID:20706207 (2010): AT4G24820.1:None: PMID:20706207 (2010): AT5G25210.1:None: PMID:20706207 (2010): AT5G26360.1:None: PMID:20706207 (2010): AT3G14790.1:None: PMID:20706207 (2010): AT3G20050.1:None: PMID:20706207 (2010): AT2G18290.1:None: PMID:20706207 (2010): AT3G11760.1:None: PMID:20706207 (2010): AT5G02530.1:None: PMID:20706207 (2010): AT5G25460.1:None: PMID:20706207 (2010): AT3G55130.1:None: PMID:20706207 (2010): AT2G04660.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT1G15250.1 cytosol [5.69]
AT1G63160.1 nucleus [5.1]
AT3G56070.1 mitochondrion [4.82]
AT1G03360.1 cytosol [4.78]
AT2G42740.1 cytosol [4.71]
AT3G23830.1 mitochondrion [4.69]
AT2G37510.1 mitochondrion [4.55]
AT4G34360.1 cytosol [4.53]
AT3G07860.1 nucleus [4.47]
AT2G41650.1 cytosol [4.45]

AT5G26360.1 cytosol
AT2G05830.1 cytosol
AT2G18290.1 cytosol
AT2G23350.1 cytosol
AT3G14790.1 cytosol
AT3G20050.1 cytosol
AT4G26870.1 cytosol
AT5G25460.1 extracellular
AT4G13850.1 mitochondrion
AT1G56110.1 nucleus
AT5G64960.1 nucleus
AT5G25210.1 nucleus
AT5G07310.1 nucleus
AT5G02530.1 nucleus
AT3G11760.1 nucleus
AT2G04660.1 nucleus
AT4G24820.1 cytosol, nucleus
AT3G55130.1 plasma membrane
AT3G11630.1 plastid
AT1G14810.1 plastid

Description (TAIR10)

protein_coding : SWIB/MDM2 domain superfamily protein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT2G35605.1); Has 990 Blast hits to 904 proteins in 230 species: Archae - 0; Bacteria - 216; Metazoa - 58; Fungi - 182; Plants - 383; Viruses - 6; Other Eukaryotes - 145 (source: NCBI BLink).

Protein Annotations

eggNOG:COG5531	eggNOG:KOG1946	EMBL:AC074360	EMBL:AC079041
EMBL:AY085089	EMBL:BT024754	EMBL:CP002684	EnsemblPlants:AT1G31760
EnsemblPlants:AT1G31760.1	entrez:840063	Gene3D:1.10.245.10	GeneID:840063
Gramene:AT1G31760.1	hmmpanther:PTHR13844	hmmpanther:PTHR13844:SF12	HOGENOM:HOG000225318
IntAct:Q9C504	InterPro:IPR003121	InterPro:IPR019835	KEGG:ath:AT1G31760
OMA:GITEIMK	Pfam:PF02201	PhylomeDB:Q9C504	PIR:B86441
Proteomes:UP000006548	RefSeq:NP_564382.1	SMART:SM00151	STRING:3702.AT1G31760.1
SUPFAM:SSF47592	TAIR:AT1G31760	UniGene:At.40279	UniProt:Q9C504

Coordinates (TAIR10)

chr1:-:11372602..11373414

Molecular Weight (calculated)

12297.10 Da

IEP (calculated)

10.57

GRAVY (calculated)

-0.25

Length

112 amino acids

Sequence (TAIR10)
(BLAST)

001: MAGISRVLGG FRTLMSKAAT VEAVTVAGEG KGIFKTRPVS QQLASFAGER ELTRGSALKK VWEYVKLHNL QNPANKKEIH CDDKLKTIFD GKDKVGITEI
101: MKLLSPHFPK SV