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AT2G18290.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.970
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : anaphase promoting complex 10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
anaphase promoting complex 10 (APC10); INVOLVED IN: regulation of DNA endoreduplication, phloem or xylem histogenesis; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anaphase-promoting complex, subunit 10 (InterPro:IPR004939), Anaphase-promoting complex, subunit 10, subgroup (InterPro:IPR016901), Galactose-binding domain-like (InterPro:IPR008979); Has 552 Blast hits to 552 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 144; Plants - 49; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
Protein Annotations
BioGrid:1702eggNOG:COG5156eggNOG:KOG3437EMBL:AC006439
EMBL:AK229538EMBL:AY087130EMBL:BT024912EMBL:CP002685
EnsemblPlants:AT2G18290EnsemblPlants:AT2G18290.1entrez:816345Gene3D:2.60.120.260
GeneID:816345Genevisible:Q9ZPW2GO:GO:0005680GO:GO:0007067
GO:GO:0008283GO:GO:0010087GO:GO:0016567GO:GO:0016604
GO:GO:0030071GO:GO:0031145GO:GO:0032875GO:GO:0032876
GO:GO:0051301Gramene:AT2G18290.1hmmpanther:PTHR12936HOGENOM:HOG000241616
InParanoid:Q9ZPW2IntAct:Q9ZPW2InterPro:IPR004939InterPro:IPR008979
InterPro:IPR016901KEGG:ath:AT2G18290KO:K03357OMA:IRQIKVY
PaxDb:Q9ZPW2Pfam:PF03256Pfam:Q9ZPW2Pfscan:PS51284
PhylomeDB:Q9ZPW2PIR:F84562PIRSF:PIRSF028841PRIDE:Q9ZPW2
PRO:PR:Q9ZPW2PROSITE:PS51284ProteinModelPortal:Q9ZPW2Proteomes:UP000006548
Reactome:R-ATH-174184Reactome:R-ATH-179409RefSeq:NP_565433.1SMART:SM01337
SMR:Q9ZPW2STRING:3702.AT2G18290.1SUPFAM:SSF49785TAIR:AT2G18290
tair10-symbols:APC10UniGene:At.21504UniGene:At.63472UniPathway:UPA00143
UniProt:Q9ZPW2
Coordinates (TAIR10) chr2:-:7948522..7950096
Molecular Weight (calculated) 21750.90 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.43
Length 192 amino acids
Sequence (TAIR10)
(BLAST)
001: MATESSESEE EGKISGGNYK LIIDDDLREM GKNAAWSVSS CKPGNGVTTL RDDNLETYWQ SDGLQPHLIN IQFQKKVKLQ LVVLYVDFKL DESYTPSKIS
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)