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AT5G03050.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:831689eggNOG:ENOG410J4THeggNOG:ENOG410Z2U1EMBL:AK117817
EMBL:BT003723EMBL:CP002688EnsemblPlants:AT5G03050EnsemblPlants:AT5G03050.1
entrez:831689GeneID:831689Gramene:AT5G03050.1hmmpanther:PTHR35500
hmmpanther:PTHR35500:SF1HOGENOM:HOG000006177IntAct:Q8GY72KEGG:ath:AT5G03050
ncoils:CoilOMA:IMIHKEHPhylomeDB:Q8GY72Proteomes:UP000006548
RefSeq:NP_195925.2STRING:3702.AT5G03050.1TAIR:AT5G03050UniGene:At.33325
UniProt:Q8GY72
Coordinates (TAIR10) chr5:-:715302..715983
Molecular Weight (calculated) 16068.70 Da
IEP (calculated) 4.24
GRAVY (calculated) -0.82
Length 140 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTEMEEDAG NGGFRKRMRA SDEEGKGDSR DGISLDHTIE NEEAETKLVA SDEMELSIAQ ILDKIESFTQ TVSNLLETGK TMLKELSNEF EERLIMIHKE
101: HVEKWQDEIK ELRLLDASNE ETTSLLHNAR YLIQNPSIEQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)