AT5G02080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNA / pantothenate metabolism flavoprotein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNA / pantothenate metabolism flavoprotein; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: 4-phospho-panto-thenoylcysteine synthetase (TAIR:AT1G12350.1); Has 1189 Blast hits to 1160 proteins in 540 species: Archae - 65; Bacteria - 597; Metazoa - 129; Fungi - 134; Plants - 69; Viruses - 5; Other Eukaryotes - 190 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:409811..411557 | ||||||||||||
| Molecular Weight (calculated) | 30493.70 Da | ||||||||||||
| IEP (calculated) | 8.19 | ||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||
| Length | 270 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEILENLNE FIKLNSSSQG GRRIVCVTSG GTTVPLEQRC VRYIDNFSSG NRGAASTENF VKAGYAVIFL YRRGTCQPYC RSLPDDPFLE CFEFSDKTNI 101: QGSLLKLPFS TIYEYLQMLR LIAEALKDVG PCSMFYLAAA VSDFYVPWKS MTEHKIESGS GPLDIRLAQV PKMLSVLRSN WAPKAFCISF KLETDSKILM 201: EKATKALRKY KVHAVVANEL STRKEEVVVV SSSGNVVVRR ECDKPESFVE DNLIRLIVDR HSTYIKESHN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)