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AT3G47675.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.950
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G39690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:AY099830EMBL:BT000320EMBL:CP002686EnsemblPlants:AT3G47675
EnsemblPlants:AT3G47675.1entrez:2745949GeneID:2745949Gramene:AT3G47675.1
hmmpanther:PTHR23054hmmpanther:PTHR23054:SF22IntAct:Q8L5Z2InterPro:IPR025757
KEGG:ath:AT3G47675ncoils:CoilPfam:PF14389Proteomes:UP000006548
RefSeq:NP_974398.1STRING:3702.AT3G47675.1TAIR:AT3G47675UniGene:At.35784
UniGene:At.75316UniProt:Q8L5Z2
Coordinates (TAIR10) chr3:-:17576101..17576537
Molecular Weight (calculated) 10932.10 Da
IEP (calculated) 4.41
GRAVY (calculated) -0.14
Length 96 amino acids
Sequence (TAIR10)
(BLAST)
1: MKFEELLMED SSQLHSNKRH DLEEGVMHLK ERLEEEEAVT RTLRAAFDGS IVSLPSLSSL FLPPQFSELF QELAIVEAEI LCLDRKIKEQ ASCVVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)