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AT2G04378.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Beta-galactosidase related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Beta-galactosidase related protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); BEST Arabidopsis thaliana protein match is: Beta-galactosidase related protein (TAIR:AT5G01080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:AK227302EMBL:CP002685EnsemblPlants:AT2G04378EnsemblPlants:AT2G04378.1
entrez:6241027ExpressionAtlas:Q0WU80GeneID:6241027Gramene:AT2G04378.1
KEGG:ath:AT2G04378OMA:KNDIMIPPhylomeDB:Q0WU80Proteomes:UP000006548
RefSeq:NP_001118265.1TAIR:AT2G04378UniGene:At.19914UniProt:Q0WU80
Coordinates (TAIR10) chr2:-:1525738..1526169
Molecular Weight (calculated) 16386.70 Da
IEP (calculated) 10.63
GRAVY (calculated) 0.26
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MQKPRSGPNL FLLSLSIILS RFMLSFDCGR QLEHTLSFLL CWCKIYLRTL PLETPRSFFH GCKSLKKSGI MIPPPRSGDY RNFFKLSSML HLFIESIQSL
101: LLLSIARDLP IVFTRVKKMG IMIPLLTSGD YPSFSKLFSP NPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)