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AT4G07825.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.851
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK117177EMBL:BT029021EMBL:CP002687EnsemblPlants:AT4G07825
EnsemblPlants:AT4G07825.1entrez:826264GeneID:826264GO:GO:0016021
Gramene:AT4G07825.1KEGG:ath:AT4G07825Proteomes:UP000006548RefSeq:NP_849341.1
STRING:3702.AT4G07825.1TAIR:AT4G07825TMHMM:TMhelixUniGene:At.44185
UniProt:Q8GZ72
Coordinates (TAIR10) chr4:+:4643843..4644586
Molecular Weight (calculated) 27603.50 Da
IEP (calculated) 9.99
GRAVY (calculated) 0.00
Length 247 amino acids
Sequence (TAIR10)
(BLAST)
001: MYFENRSTTP PLSKPLAQKF LSNTIIETIT FTMFSDAGRV FARRRRDIVC FSQSFRNLSR FLLHLFIIFY HPSLLSPCFH GVPLYRDNIN RGFPANPVSL
101: IRPVNSVKEE PMSSHSPNAK FESCLPKISR SLKSRTFAIL VAHYLYRIPS KTNLSSPSSL MEWRADLTLK PVMMILTAEV LILNLTKPCC SFIASYPYTC
201: GGINNISPTE ATLGFSLLGL SNCCSPSSLS RPTSTNLSLS HNHSSPG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)