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AT2G17260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutamate receptor 2
Curator
Summary (TAIR10)
Encodes a glutamate receptor. Involved in calcium-programmed stomatal closure.
Computational
Description (TAIR10)
glutamate receptor 2 (GLR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, stomatal movement; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT4G35290.1); Has 6275 Blast hits to 6137 proteins in 506 species: Archae - 28; Bacteria - 848; Metazoa - 4591; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink).
Protein Annotations
BioGrid:1588eggNOG:ENOG410ISR7eggNOG:ENOG410Y9VHEMBL:AF038557
EMBL:AF079999EMBL:AY495448EMBL:CP002685EnsemblPlants:AT2G17260
EnsemblPlants:AT2G17260.1entrez:816231GeneID:816231Genevisible:Q7XJL2
GO:GO:0004970GO:GO:0005262GO:GO:0005622GO:GO:0005886
GO:GO:0006816GO:GO:0008066GO:GO:0016021GO:GO:0019722
GO:GO:0070588GO:GO:0071230Gramene:AT2G17260.1hmmpanther:PTHR18966
hmmpanther:PTHR18966:SF222HOGENOM:HOG000239558InParanoid:Q7XJL2InterPro:IPR001320
InterPro:IPR001638InterPro:IPR001828InterPro:IPR017103InterPro:IPR028082
KEGG:ath:AT2G17260KO:K05387ncoils:CoilPaxDb:Q7XJL2
Pfam:PF00060Pfam:PF00497Pfam:PF01094Pfam:Q7XJL2
PhylomeDB:Q7XJL2PIR:T51132PIR:T51133PIRSF:PIRSF037090
PRIDE:Q7XJL2PRO:PR:Q7XJL2ProteinModelPortal:Q7XJL2Proteomes:UP000006548
RefSeq:NP_028351.2SMART:SM00079SMR:Q7XJL2STRING:3702.AT2G17260.1
SUPFAM:SSF53822SUPFAM:SSF53850TAIR:AT2G17260tair10-symbols:ATGLR2
tair10-symbols:ATGLR3.1tair10-symbols:GLR2tair10-symbols:GLR3.1TMHMM:TMhelix
UniGene:At.10492UniProt:Q7XJL2
Coordinates (TAIR10) chr2:+:7504780..7508266
Molecular Weight (calculated) 106184.00 Da
IEP (calculated) 8.02
GRAVY (calculated) 0.07
Length 951 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFPTFSFHF SKVSLCFLLK QLLLYGFFFS MNWVLLSFII VLGGGLLLSE GASSSRPPVI KVGAIFGLNT MYGETANIAF KAAEEDVNSD PSFLGGSKLR
101: ILMNDAKRSG FLSIMGALQF METDVVAIIG PQTSIMAHVL SHLANELTVP MLSFTALDPT LSPLQFPFFV QTAPSDLFLM RAIAEMITYY GWSDVVALYN
201: DDDNSRNGVT ALGDELEERR CKISYKAVLP LDVVITSPVE IIEELIKIRG MESRVIVVNT FPNTGKMIFK EAERLGMMEK GYVWIATTWL SSVLDSNLPL
301: DTKLVNGVLT LRLHTPDSRK KRDFAARWKN KLSNNKTIGL NVYGLYAYDT VWIIARAVKT LLEAGGNLSF SNDAKLGSLK GEALNLSALS RFDQGSQLLD
401: YIVHTKMSGL TGPVQFHPDR SMLQPSYDII NLVDDRVHQI GYWSNYSGLS IVPPESFYSK PPNRSSSNQH LNSVTWPGGT SVTPRGWIFR NNGRRLRIGV
501: PDRASFKDFV SRVNGSSNKV QGYCIDVFEA AVKLLSYPVP HEFIFFGDGL TNPNYNELVN KVTTGVDFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA
601: PVTRLNENPW AFLRPFTLPM WAVTASFFVI VGAAIWILEH RINDEFRGPP RRQIITILWF TFSTMFFSHR ETTVSTLGRM VLLIWLFVVL IITSSYTASL
701: TSILTVQQLN SPIKGVDTLI SSTGRIGFQV GSFAENYMTD ELNIASSRLV PLASPEEYAN ALQNGTVAAI VDERPYIDLF LSDYCKFAIR GQEFTRCGWG
801: FAFPRDSPLA VDMSTAILGL SETGELQKIH DRWLSKSNCS SPHGSQSGDS EQLNVHSFWG MFLVVGIACL VALFIHFFKI IRDFCKDTPE VVVEEAIPSP
901: KSSRLTKLQT FLAFVDEKEE ETKRRLKRKR NNDHSMNANS IISRTASRRP I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)