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AT4G34360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.987
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 2390 Blast hits to 2390 proteins in 771 species: Archae - 92; Bacteria - 1226; Metazoa - 381; Fungi - 88; Plants - 206; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G34360-MONOMERDNASU:829586eggNOG:ENOG410XNZZeggNOG:KOG2352
EMBL:BT014787EMBL:BT015019EMBL:CP002687EnsemblPlants:AT4G34360
EnsemblPlants:AT4G34360.1entrez:829586Gene3D:3.40.50.150GeneID:829586
GO:GO:0008168Gramene:AT4G34360.1hmmpanther:PTHR12176hmmpanther:PTHR12176:SF16
HOGENOM:HOG000005863InterPro:IPR025714InterPro:IPR029063KEGG:ath:AT4G34360
OMA:YWDERFGPfam:PF13847PhylomeDB:Q6ID86Proteomes:UP000006548
RefSeq:NP_195162.2SMR:Q6ID86STRING:3702.AT4G34360.1SUPFAM:SSF53335
TAIR:AT4G34360UniGene:At.31508UniProt:Q6ID86
Coordinates (TAIR10) chr4:+:16432011..16433752
Molecular Weight (calculated) 28713.70 Da
IEP (calculated) 4.40
GRAVY (calculated) -0.53
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MENPNSVGPP SALTYLDPHY WDERFSSEEH YEWFKDYSHF QHLIISNIKP SSSVLELGCG NSQLCEELYK DGIVDITCID LSSVAVEKMQ SRLLPKGYKE
101: IKVVQADMLD LPFDSESFDV VIEKGTMDVL FVDAGDPWNP RPETVSKVMA TLDGVHRVLK PDGIFISITF GQPHFRRPLF KDPKFTWSME YNTFGDGFHY
201: FFYILRKGKR CNDEKEDEKC NDPSISLYQD ELEGEDYLFR TRIDDGED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)