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AT1G77450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 32
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUECeggNOG:ENOG41106YGEMBL:AC010704EMBL:AK118985EMBL:BT008538EMBL:CP002684EnsemblPlants:AT1G77450
EnsemblPlants:AT1G77450.1entrez:844081GeneID:844081GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
Gramene:AT1G77450.1hmmpanther:PTHR31719hmmpanther:PTHR31719:SF3HOGENOM:HOG000237406InterPro:IPR003441KEGG:ath:AT1G77450OMA:KWKEWEN
Pfam:PF02365Pfscan:PS51005PhylomeDB:Q9CAR0PIR:G96803PROSITE:PS51005Proteomes:UP000006548RefSeq:NP_177869.1
SMR:Q9CAR0STRING:3702.AT1G77450.1SUPFAM:SSF101941TAIR:AT1G77450tair10-symbols:anac032tair10-symbols:NAC032UniGene:At.17802
UniProt:Q9CAR0
Coordinates (TAIR10) chr1:+:29100029..29100981
Molecular Weight (calculated) 28745.30 Da
IEP (calculated) 8.66
GRAVY (calculated) -0.54
Length 253 amino acids
Sequence (TAIR10)
(BLAST)
001: MMKSGADLQF PPGFRFHPTD EELVLMYLCR KCASQPIPAP IITELDLYRY DPWDLPDMAL YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPI
101: GRPKPVGIKK ALVFYSGKPP NGEKTNWIMH EYRLADVDRS VRKKNSLRLD DWVLCRIYNK KGVIEKRRSD IEDGLKPVTD TCPPESVARL ISGSEQAVSP
201: EFTCSNGRLS NALDFPFNYV DAIADNEIVS RLLGGNQMWS TTLDPLVVRQ GTF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)