AT3G28740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.503 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cytochrome P450 superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the cytochrome p450 family. Expression is upregulated in response to cis-jasmonate treatment. Overexpression induces synthesis of volatile compounds that affect chemical ecology and insect interactions. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CYP81D1; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone, defense response to insect; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 7 (TAIR:AT2G23190.1); Has 36095 Blast hits to 35936 proteins in 1857 species: Archae - 61; Bacteria - 5661; Metazoa - 11857; Fungi - 7468; Plants - 9503; Viruses - 3; Other Eukaryotes - 1542 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:10788764..10790552 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57695.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 509 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSTKTIMET IYLILSLFFF FIFLSLKLLF GPRPRKLNLP PSPSRPFPII GHLHLLKLPL HRRFLSLSES LNNAKIFSLS LGSRLVFVVS SHAVAEECFT 101: KNDVVLANRP EFLVGKHIGY NSTTMVGAAY GDSWRNLRRI GTIEIFSSLR LNSFVSIRQD EIRRLIICLA KNSQHGFVKV EMKPLFMCLT INNIIRMVAG 201: KRFYGDGTEN DNEAKHVRQL IAEVVVSGGA GNAADYFPIL RYVTNYEKHV KKLAGRVDEF LQSLVNEKRV EKVKGNTMID HLLSLQETQP DYYTDVIIKG 301: IILVMILAGT DTSAGTLEWA MSNLLNHPEV LRKAKTEIDD QIGVDRLVEE QDIVKLPYLQ HIVSETLRLY PVAPMLLPHL ASEDCIVDGY DVPRGTIILV 401: NAWAIHRDPK LWEEPEKFKP ERFEKKGEDK KLMPFGIGRR SCPGSGLAQR LVTLALGSLV QCFEWERVEE KYLDMRESEK GTTMRKATSL QAMCKARPIV 501: HKVLDASCP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)