AT5G45620.1::SUBA5

AT5G45620.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31818904 (2020): mitochondrion PMID:31520498 (2020): mitochondrion PMID:30961429 (2019): nucleus PMID:30783145 (2019): extracellular region plant-type cell wall PMID:28865150 (2017): extracellular region plant-type cell wall PMID:27177187 (2016): nucleus PMID:25900983 (2015): Golgi trans-Golgi network PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body PMID:23673981 (2013): plastid plastid stroma plastoglobules PMID:21166475 (2011): cytosol PMID:14623896 (2004): cytosol	PMID:21798944 (2011): AT4G25200.1:Y2H: PMID:21798944 (2011): AT4G17785.1:None: PMID:21798944 (2011): AT4G02590.1:None: PMID:20706207 (2010): AT2G20140.1:None: PMID:20706207 (2010): AT3G15180.1:None: PMID:20706207 (2010): AT1G45000.1:None: PMID:20706207 (2010): AT1G20200.1:None: PMID:20706207 (2010): AT4G24820.1:None: PMID:20706207 (2010): AT4G19006.1:None: PMID:20706207 (2010): AT1G04810.1:None: PMID:20706207 (2010): AT3G11270.1:None: PMID:20706207 (2010): AT3G05530.1:None: PMID:20706207 (2010): AT1G29150.1:None: PMID:20706207 (2010): AT2G32730.1:None: PMID:20706207 (2010): AT1G53750.1:None: PMID:20706207 (2010): AT5G58290.1:None: PMID:20706207 (2010): AT5G23540.1:None: PMID:14623884 (2004): AT4G28470.1:None: PMID:14623884 (2004): AT1G20200.1:None: PMID:14623884 (2004): AT2G32730.1:None: PMID:14623884 (2004): AT5G58290.1:None: PMID:14623884 (2004): AT3G14290.1:None: PMID:14623884 (2004): AT3G22110.1:None: PMID:14623884 (2004): AT5G64760.1:None: PMID:14623884 (2004): AT1G53780.1:None: PMID:14623884 (2004): AT5G09900.1:None: PMID:14623884 (2004): AT1G45000.1:None: PMID:14623884 (2004): AT5G05780.1:None: PMID:14623884 (2004): AT1G53750.1:None: PMID:14623884 (2004): AT4G29040.1:None: PMID:14623884 (2004): AT1G04810.1:None: PMID:14623884 (2004): AT4G14800.1:None: PMID:14623884 (2004): AT1G29150.1:None: PMID:14623884 (2004): AT5G35590.1:None: PMID:14623884 (2004): AT3G22630.1:None: PMID:14623884 (2004): AT1G53850.1:None: PMID:14623884 (2004): AT1G64520.1:None: PMID:14623884 (2004): AT4G24820.1:None: PMID:14623884 (2004): AT4G31300.1:None: PMID:14623884 (2004): AT2G20580.1:None: PMID:14623884 (2004): AT3G05530.1:None: PMID:14623884 (2004): AT1G75990.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT4G01320.1 endoplasmic reticulum [8.38]
AT5G09900.1 cytosol, nucleus [7.41]
AT3G60820.1 cytosol, nucleus [7.19]
AT4G39520.1 cytosol [7.11]
AT1G64520.1 cytosol, nucleus [7.0]
AT3G05280.1 golgi [6.88]
AT4G19006.1 cytosol, nucleus [6.7]
AT5G05780.1 cytosol, nucleus [6.64]
AT1G72550.1 cytosol [6.52]
AT1G21720.1 cytosol, nucleus [6.48]

AT4G25200.1 mitochondrion
AT4G17785.1 nucleus
AT4G02590.1 nucleus
AT3G22110.1 cytosol, nucleus
AT5G64760.1 cytosol, nucleus
AT5G58290.1 cytosol, nucleus
AT5G35590.1 cytosol, nucleus
AT5G23540.1 cytosol, nucleus
AT5G09900.1 cytosol, nucleus
AT5G05780.1 cytosol, nucleus
AT4G31300.1 cytosol, nucleus
AT4G29040.1 cytosol, nucleus
AT4G28470.1 cytosol, nucleus
AT4G24820.1 cytosol, nucleus
AT4G19006.1 cytosol, nucleus
AT3G22630.1 cytosol, nucleus
AT2G20140.1 cytosol, nucleus
AT1G20200.1 cytosol, nucleus
AT1G29150.1 cytosol, nucleus
AT1G45000.1 cytosol, nucleus
AT1G53750.1 cytosol, nucleus
AT1G53780.1 cytosol, nucleus
AT1G53850.1 cytosol, nucleus
AT1G64520.1 cytosol, nucleus
AT1G75990.1 cytosol, nucleus
AT1G04810.1 cytosol, nucleus
AT2G20580.1 cytosol, nucleus
AT2G32730.1 cytosol, nucleus
AT3G05530.1 cytosol, nucleus
AT3G11270.1 cytosol, nucleus
AT3G14290.1 cytosol, nucleus
AT3G15180.1 cytosol, nucleus
AT4G14800.1 cytosol, vacuole

Description (TAIR10)

protein_coding : Proteasome component (PCI) domain protein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT4G19006.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Protein Annotations

BioGrid:19851	eggNOG:ENOG410XPG9	eggNOG:KOG2908	EMBL:AB012245
EMBL:AY093136	EMBL:AY230841	EMBL:BT003384	EMBL:CP002688
EnsemblPlants:AT5G45620	EnsemblPlants:AT5G45620.1	entrez:834602	ExpressionAtlas:Q8RWF0
GeneID:834602	Genevisible:Q8RWF0	GO:GO:0000502	GO:GO:0005829
hmmpanther:PTHR10539	HOGENOM:HOG000216633	InParanoid:Q8RWF0	IntAct:Q8RWF0
InterPro:IPR000717	InterPro:IPR011991	KEGG:ath:AT5G45620	KO:K03039
OMA:NSQDAYV	PaxDb:Q8RWF0	Pfam:PF01399	Pfam:Q8RWF0
PhylomeDB:Q8RWF0	PRIDE:Q8RWF0	PRO:PR:Q8RWF0	ProteinModelPortal:Q8RWF0
Proteomes:UP000006548	Reactome:R-ATH-1236978	Reactome:R-ATH-174184	Reactome:R-ATH-349425
Reactome:R-ATH-5632684	Reactome:R-ATH-68949	Reactome:R-ATH-69017	Reactome:R-ATH-983168
RefSeq:NP_199375.2	SMART:SM00088	SMR:Q8RWF0	STRING:3702.AT5G45620.1
SUPFAM:SSF46785	TAIR:AT5G45620	UniGene:At.23294	UniGene:At.74818
UniProt:Q8RWF0

Coordinates (TAIR10)

chr5:+:18501590..18503868

Molecular Weight (calculated)

44170.20 Da

IEP (calculated)

4.98

GRAVY (calculated)

-0.03

Length

386 amino acids

Sequence (TAIR10)
(BLAST)

001: MAALQYLESL KNTHPELGEW YNSLADLYQK KLWHQLTLKL EQFIALAVFQ AGDALIQFYH NFITDFETKI NLLKLAHFAV VVSRQYSEKE AAVSYLESVI
101: EKLRATKEPR ITEPIIYIET QKALFKLEQG DQKECKKILD DGKSSLDSMT DIDPSVYANF YWVSSQYHKC RQEFSDFYKS ALLYLAYTSV EDLSESFKLD
201: LAFDLSLSAL LGENIYNFGE LLAHPILKSL LGTNVEWLYH ILQAFNHGDL VQYQELCRVH NASLIAQPAL VENEKKLLEK INILCLIEII FSRPAEDRTI
301: PLSIIAERTK LSIEDVEHLL MKSLSVHLIE GIIDQVNGTI YVSWAQPRVL GIPQIKALRD QLDSWVDKVH TTLLSVEAET PDLVAA